G2163972


Basic Information

Item Value
gene id G2163972
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 21713203 ~ 21715005 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2473754
aaatagcaaatgtgcctactctggtcttggcacgtgcgATCTAGCCAACAACTATCAAATACCGtgtgggtaggctagtctacatgatgagattattatggattagaatgtttgtcaaacggcagtcaagcatcgatcatcatgttaccaccctgtgaagttcatcataaataATTTATTCTGTAGTTTAATAAACTGTGGTTTcccgagtcatagtgggaggaccacacaccatatcatcatgTGACTCCAAAtgtacttcgatatgatggttgtTCTAAAAATATTTGCGCATAAGGGCATTTCCACTGCCAGTTCTCGCAtagtacattttacagacacagaaagatcccaccatgtcaaacaaacaaatgatctgtcagcatttataaaaTGGTACTGAAATTTCCTTTTTCCATCACAGTTGATTTATACGctatgactttactcgcataaaaactggatggaaacatggtttgTGAGATTTAATGAGGTCTACAAACAGGTTCTCTTCTCTTTATCCCTTGTTGCTTTTAAAGACAGTCTCACTATACCAAACTCCATGTCTTTATGTATAATATGTCAGTTTCTGATATATTAGTCTTTCTTAGTCTTCATTTTGTCGTTTGTACGTTTTACATCGAATATAGACCCATGTATTCATTTATCCAAAAGCAAATAGTCCAAAGAAACTTACTGGTGTGGCAATTATGGTTTCATGCTTTTAATTCATGCACTGATTTTTCTTGTAGGGTTAAATTTTTTGGCATGGTTGATCCATCCCCGCACTTGAGTTTTGTCTGTCATCCATTCAGTGACACACTCCACTTTCTCATTTAGGAGTTGTTTGTGAAATCTATTGTTGCCTTTGTGAAGACTTGCACAAATAAGTTGGAATCCAACTGGCTAGCTAGACCAGTACTATATTGGAACTCAAGGACATACAGTTAAGGCTATGATTTGTCCGACATGATGAATATAATGAAATTGTAAGTGTAGGTTCTAGATAATGCCACTGAAATTGATTTCATTTTTAAGTGGTATTTTTTTTAGACAACCATAGTCGAGGGATTTAATCTGTAGATCTTACATAAGAATTTCCAACAGTAAATTATCCTGGAAATGCAGTCGTTGATTTGGTGATCTCCAATACTATACACTTGCCTCGTACACTTTGTTGGTAGGATGAGAATTTATAACAAAGATATGCATGCAATCAATATGAGAGGACTGATCTATTCTATTGTGTAAGCCAGAGTGTTATTCTAAAACGGAAcaacttcagcCTCCTTTCAAGGGGTGGCAGCATGCGAATACAATAACTGTTTTACGTCAGTAGAGGGAGCAAGTGTTGCAGAAACGAGGCGTACAGTTTGATAACGCCATACCTCTTTTTATAAACTAGCATTTCAAGGGTTTTGATACACACAACTCAAATACTGTTTGTTATAAAGAACTGAATTCagatgacaaaaaaatatatattttgccgCTAACTAATGGCTTCGCAGAAACGCAGGTCTTGATTTTATCCGGTGGGTATAACAAGATGCTAATGTTCACTGTAAGTACAAGATGGCTAACAAATACTctttccttctccttcagaaATGTAGACTATTCTCAATTCTAATTGAGCATCAATGTTGTTTGTCTTATTTTATGGAAACATGTCATATTGTTTGTACTTTTTATACTCTGCCtggctacaatttttttttattttaacttatttTAATTCCAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2473754 True 1744 lncRNA 0.36 2 21713203 21715005

Neighbor

gene id symbol gene type direction distance location
LOC110509813 LOC106563271 coding upstream 4246 21670528 ~ 21708957 (+)
LOC110509811 LOC106563272 coding upstream 323541 21160126 ~ 21389662 (+)
LOC100135840 grp78 coding upstream 575609 21133409 ~ 21137594 (+)
dnm1a dnm1 coding upstream 617028 21004249 ~ 21096175 (+)
cyh9orf16 cssa11h9orf16 coding upstream 727926 20983463 ~ 20985277 (+)
pappaa LOC106563270 coding downstream 34275 21749280 ~ 21875071 (+)
LOC118945260 NA coding downstream 248668 21963673 ~ 21974980 (+)
trim32 LOC106563269 coding downstream 270760 21985765 ~ 21990241 (+)
LOC110509823 LOC106563263 coding downstream 1596631 23311636 ~ 23325364 (+)
LOC118945326 NA coding downstream 1664900 23379905 ~ 23382422 (+)
G2163944 NA non-coding upstream 80423 21632551 ~ 21632780 (+)
G2163817 NA non-coding upstream 95105 21617831 ~ 21618098 (+)
G2163805 NA non-coding upstream 110938 21601714 ~ 21602265 (+)
G2163800 NA non-coding upstream 116792 21596095 ~ 21596411 (+)
G2163664 NA non-coding upstream 268126 21444774 ~ 21445077 (+)
G2164087 NA non-coding downstream 32715 21747720 ~ 21748171 (+)
G2164116 NA non-coding downstream 60596 21775601 ~ 21775818 (+)
G2164126 NA non-coding downstream 74710 21789715 ~ 21790012 (+)
G2164131 NA non-coding downstream 81092 21796097 ~ 21796303 (+)
G2164144 NA non-coding downstream 103853 21818858 ~ 21819068 (+)
G2163804 LOC106613263 other upstream 112151 21600418 ~ 21601052 (+)
G2161678 NA other upstream 1915429 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 1960460 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 2096692 19609602 ~ 19616511 (+)
G2165628 LOC106563266 other downstream 1122066 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 1410775 23125780 ~ 23134290 (+)
LOC110509345 LOC106563260 other downstream 1800617 23468400 ~ 23534217 (+)
LOC110509837 LOC106563250 other downstream 2070614 23785060 ~ 23793640 (+)
LOC110509859 LOC106563234 other downstream 2785403 24500361 ~ 24532163 (+)

Expression


Co-expression Network