Gene
RNA
| Item | Value |
|---|---|
| gene id | G2164116 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 21775601 ~ 21775818 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2473900 | True | 218 | lncRNA | 0.43 | 1 | 21775601 | 21775818 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509813 | LOC106563271 | coding | upstream | 66644 | 21670528 ~ 21708957 (+) |
| LOC110509811 | LOC106563272 | coding | upstream | 385939 | 21160126 ~ 21389662 (+) |
| LOC100135840 | grp78 | coding | upstream | 638007 | 21133409 ~ 21137594 (+) |
| dnm1a | dnm1 | coding | upstream | 679426 | 21004249 ~ 21096175 (+) |
| cyh9orf16 | cssa11h9orf16 | coding | upstream | 790324 | 20983463 ~ 20985277 (+) |
| LOC118945260 | NA | coding | downstream | 187855 | 21963673 ~ 21974980 (+) |
| trim32 | LOC106563269 | coding | downstream | 209947 | 21985765 ~ 21990241 (+) |
| LOC110509823 | LOC106563263 | coding | downstream | 1535818 | 23311636 ~ 23325364 (+) |
| LOC118945326 | NA | coding | downstream | 1604087 | 23379905 ~ 23382422 (+) |
| LOC110509824 | LOC106563262 | coding | downstream | 1630185 | 23406003 ~ 23408940 (+) |
| G2164087 | NA | non-coding | upstream | 27430 | 21747720 ~ 21748171 (+) |
| G2163972 | NA | non-coding | upstream | 60596 | 21713203 ~ 21715005 (+) |
| G2163944 | NA | non-coding | upstream | 142821 | 21632551 ~ 21632780 (+) |
| G2163817 | NA | non-coding | upstream | 157503 | 21617831 ~ 21618098 (+) |
| G2163805 | NA | non-coding | upstream | 173336 | 21601714 ~ 21602265 (+) |
| G2164126 | NA | non-coding | downstream | 13897 | 21789715 ~ 21790012 (+) |
| G2164131 | NA | non-coding | downstream | 20279 | 21796097 ~ 21796303 (+) |
| G2164144 | NA | non-coding | downstream | 43040 | 21818858 ~ 21819068 (+) |
| G2164149 | NA | non-coding | downstream | 52543 | 21828361 ~ 21828707 (+) |
| G2164156 | NA | non-coding | downstream | 58881 | 21834699 ~ 21834926 (+) |
| G2163804 | LOC106613263 | other | upstream | 174549 | 21600418 ~ 21601052 (+) |
| G2161678 | NA | other | upstream | 1977827 | 19795260 ~ 19797774 (+) |
| G2161635 | LOC106563312 | other | upstream | 2022858 | 19741814 ~ 19752743 (+) |
| LOC110509766 | LOC106566689 | other | upstream | 2159090 | 19609602 ~ 19616511 (+) |
| G2165628 | LOC106563266 | other | downstream | 1061253 | 22837071 ~ 22841481 (+) |
| G2165973 | LOC106563265 | other | downstream | 1349962 | 23125780 ~ 23134290 (+) |
| LOC110509345 | LOC106563260 | other | downstream | 1739804 | 23468400 ~ 23534217 (+) |
| LOC110509837 | LOC106563250 | other | downstream | 2009801 | 23785060 ~ 23793640 (+) |
| LOC110509859 | LOC106563234 | other | downstream | 2724590 | 24500361 ~ 24532163 (+) |
