Gene
RNA
| Item | Value |
|---|---|
| gene id | G2164149 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 21828361 ~ 21828707 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2473933 | True | 347 | lncRNA | 0.52 | 1 | 21828361 | 21828707 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509813 | LOC106563271 | coding | upstream | 119404 | 21670528 ~ 21708957 (+) |
| LOC110509811 | LOC106563272 | coding | upstream | 438699 | 21160126 ~ 21389662 (+) |
| LOC100135840 | grp78 | coding | upstream | 690767 | 21133409 ~ 21137594 (+) |
| dnm1a | dnm1 | coding | upstream | 732186 | 21004249 ~ 21096175 (+) |
| cyh9orf16 | cssa11h9orf16 | coding | upstream | 843084 | 20983463 ~ 20985277 (+) |
| LOC118945260 | NA | coding | downstream | 134966 | 21963673 ~ 21974980 (+) |
| trim32 | LOC106563269 | coding | downstream | 157058 | 21985765 ~ 21990241 (+) |
| LOC110509823 | LOC106563263 | coding | downstream | 1482929 | 23311636 ~ 23325364 (+) |
| LOC118945326 | NA | coding | downstream | 1551198 | 23379905 ~ 23382422 (+) |
| LOC110509824 | LOC106563262 | coding | downstream | 1577296 | 23406003 ~ 23408940 (+) |
| G2164144 | NA | non-coding | upstream | 9293 | 21818858 ~ 21819068 (+) |
| G2164131 | NA | non-coding | upstream | 32058 | 21796097 ~ 21796303 (+) |
| G2164126 | NA | non-coding | upstream | 38349 | 21789715 ~ 21790012 (+) |
| G2164116 | NA | non-coding | upstream | 52543 | 21775601 ~ 21775818 (+) |
| G2164087 | NA | non-coding | upstream | 80190 | 21747720 ~ 21748171 (+) |
| G2164156 | NA | non-coding | downstream | 5992 | 21834699 ~ 21834926 (+) |
| G2164164 | NA | non-coding | downstream | 16994 | 21845701 ~ 21846044 (+) |
| G2164169 | NA | non-coding | downstream | 28998 | 21857705 ~ 21858710 (+) |
| G2164171 | NA | non-coding | downstream | 33814 | 21862521 ~ 21862789 (+) |
| pappaa | LOC106563270 | non-coding | downstream | 42532 | 21749280 ~ 21875071 (+) |
| G2163804 | LOC106613263 | other | upstream | 227309 | 21600418 ~ 21601052 (+) |
| G2161678 | NA | other | upstream | 2030587 | 19795260 ~ 19797774 (+) |
| G2161635 | LOC106563312 | other | upstream | 2075618 | 19741814 ~ 19752743 (+) |
| LOC110509766 | LOC106566689 | other | upstream | 2211850 | 19609602 ~ 19616511 (+) |
| G2165628 | LOC106563266 | other | downstream | 1008364 | 22837071 ~ 22841481 (+) |
| G2165973 | LOC106563265 | other | downstream | 1297073 | 23125780 ~ 23134290 (+) |
| LOC110509345 | LOC106563260 | other | downstream | 1686915 | 23468400 ~ 23534217 (+) |
| LOC110509837 | LOC106563250 | other | downstream | 1956912 | 23785060 ~ 23793640 (+) |
| LOC110509859 | LOC106563234 | other | downstream | 2671701 | 24500361 ~ 24532163 (+) |
