G2164579



Basic Information


Item Value
gene id G2164579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 21850264 ~ 21850582 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2474371
gagcaaatgaggtgagaagggaggtaaaggcaaaaaaaggccttggtggcaaggtaaatacaatatagcaagtaaaacactggaatggtagttttgcaatggaagaatgtgcaaagtagaaataaaaataatggggtgcaaaggagcaaaataaataaataaattaaatacagttgggaaagaggtagttgatagggctaaatgatatgtgggctatgtacaggtgcagtaatctgtgagctgctctgacagttggtgcttaaagctagtgagggagataagtgtttccagtttcagagatttttgtagttcgttccag

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2474371 True 319 lncRNA 0.39 1 21850264 21850582

Neighbor


gene id symbol gene type direction distance location
LOC118945362 NA coding downstream 324751 21519877 ~ 21525513 (-)
rabepk rabepk coding downstream 703770 21138218 ~ 21146494 (-)
LOC110509343 NA coding downstream 722300 21124159 ~ 21132785 (-)
golga2 golga2 coding downstream 728255 21096285 ~ 21122009 (-)
ciz1a ciz1 coding downstream 852167 20985126 ~ 20998097 (-)
LOC110509815 LOC106563268 coding upstream 29045 21879566 ~ 22337506 (-)
LOC110509818 LOC104924185 coding upstream 743019 22593601 ~ 22594656 (-)
LOC110509819 LOC106563266 coding upstream 986472 22837054 ~ 22957768 (-)
LOC110509820 LOC106563265 coding upstream 1276028 23126610 ~ 23169638 (-)
LOC110509821 kad coding upstream 1330773 23181355 ~ 23191969 (-)
G2164555 LOC106563270 non-coding downstream 67564 21782445 ~ 21782700 (-)
G2164542 NA non-coding downstream 79970 21770084 ~ 21770294 (-)
G2164540 LOC106563270 non-coding downstream 81289 21768682 ~ 21768975 (-)
G2163943 NA non-coding downstream 218024 21632022 ~ 21632240 (-)
G2163928 NA non-coding downstream 230742 21619210 ~ 21619522 (-)
G2164584 NA non-coding upstream 10136 21860718 ~ 21860941 (-)
G2164591 NA non-coding upstream 24040 21874622 ~ 21875047 (-)
G2164592 NA non-coding upstream 26760 21877342 ~ 21877570 (-)
G2164609 NA non-coding upstream 50916 21901498 ~ 21952538 (-)
G2163923 NA other downstream 237303 21612563 ~ 21612961 (-)
G2163913 NA other downstream 252769 21596551 ~ 21597495 (-)
surf4 LOC106563281 other downstream 873316 20970332 ~ 20978032 (-)
G2162422 LOC106563345 other downstream 1520126 20329748 ~ 20330138 (-)
LOC110509827 LOC106563259 other upstream 1690560 23540883 ~ 23552798 (-)
LOC110509849 enp2 other upstream 2432968 24231769 ~ 24286433 (-)
LOC110509347 LOC106565457 other upstream 2550267 24400755 ~ 24407113 (-)
LOC110509858 LOC106563233 other upstream 2679608 24530156 ~ 24537449 (-)
G2167965 LOC106563228 other upstream 2996571 24847153 ~ 24869810 (-)

Expression



Co-expression Network