G2165167


Basic Information

Item Value
gene id G2165167
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 22525692 ~ 22525979 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2474971
cccttgacaACTTTGCACAGTCTTTGCATTCTCTTAacctgcttcacctggaatgcttttccaacaatcttgaaggagttcccacatatgctgagcatatgttagctgcttttccttcactctgcggtccaactcatcccaaaccatctcaactgggttggggtcggatgattgtggaggccagatcatctgatgcatcactccatcactctcctttttcatcaaatagcccttacacagcccggaggtgtgttgggttattgtcctgttgtaaaacaaatgctagtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2474971 True 288 lncRNA 0.46 1 22525692 22525979

Neighbor

gene id symbol gene type direction distance location
trim32 LOC106563269 coding upstream 535451 21985765 ~ 21990241 (+)
LOC118945260 NA coding upstream 550712 21963673 ~ 21974980 (+)
pappaa LOC106563270 coding upstream 650621 21749280 ~ 21875071 (+)
LOC110509813 LOC106563271 coding upstream 816735 21670528 ~ 21708957 (+)
LOC110509811 LOC106563272 coding upstream 1136030 21160126 ~ 21389662 (+)
LOC110509823 LOC106563263 coding downstream 785657 23311636 ~ 23325364 (+)
LOC118945326 NA coding downstream 853926 23379905 ~ 23382422 (+)
LOC110509824 LOC106563262 coding downstream 880024 23406003 ~ 23408940 (+)
LOC110509825 LOC106563261 coding downstream 885563 23399671 ~ 23465618 (+)
LOC110509345 LOC106563260 coding downstream 942421 23468400 ~ 23534217 (+)
G2165024 NA non-coding upstream 86997 22438457 ~ 22438695 (+)
G2165009 NA non-coding upstream 96632 22428760 ~ 22429060 (+)
G2164171 NA non-coding upstream 662903 21862521 ~ 21862789 (+)
G2164169 NA non-coding upstream 666982 21857705 ~ 21858710 (+)
G2165177 NA non-coding downstream 4438 22530417 ~ 22530648 (+)
G2165200 NA non-coding downstream 18903 22544882 ~ 22545087 (+)
G2165252 NA non-coding downstream 80978 22606957 ~ 22607172 (+)
G2165293 NA non-coding downstream 147972 22673951 ~ 22749965 (+)
G2165377 NA non-coding downstream 254636 22780615 ~ 22780831 (+)
G2163804 LOC106613263 other upstream 924640 21600418 ~ 21601052 (+)
G2161678 NA other upstream 2727918 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 2772949 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 2909181 19609602 ~ 19616511 (+)
G2165628 LOC106563266 other downstream 311092 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 599801 23125780 ~ 23134290 (+)
LOC110509837 LOC106563250 other downstream 1259640 23785060 ~ 23793640 (+)
LOC110509859 LOC106563234 other downstream 1974429 24500361 ~ 24532163 (+)

Expression


Co-expression Network