G2165377


Basic Information

Item Value
gene id G2165377
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 22780615 ~ 22780831 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2475185
gccctggctgtgtgtttcgggtcgttgtcatgctggaagacccagccatgacccatcttcaatgctcttactgagggaaggaggttgttggccaagatctcgcgatacatggccccatccatcctcccctcaatatggtgcagtcgtcctgtcccctttgcagaaaagcatccccaaagaatgatgtttccacctccatgcttcacggttgggatgg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2475185 True 217 lncRNA 0.54 1 22780615 22780831

Neighbor

gene id symbol gene type direction distance location
trim32 LOC106563269 coding upstream 790374 21985765 ~ 21990241 (+)
LOC118945260 NA coding upstream 805635 21963673 ~ 21974980 (+)
pappaa LOC106563270 coding upstream 905544 21749280 ~ 21875071 (+)
LOC110509813 LOC106563271 coding upstream 1071658 21670528 ~ 21708957 (+)
LOC110509811 LOC106563272 coding upstream 1390953 21160126 ~ 21389662 (+)
LOC110509823 LOC106563263 coding downstream 530805 23311636 ~ 23325364 (+)
LOC118945326 NA coding downstream 599074 23379905 ~ 23382422 (+)
LOC110509824 LOC106563262 coding downstream 625172 23406003 ~ 23408940 (+)
LOC110509825 LOC106563261 coding downstream 630711 23399671 ~ 23465618 (+)
LOC110509345 LOC106563260 coding downstream 687569 23468400 ~ 23534217 (+)
G2165293 NA non-coding upstream 30650 22673951 ~ 22749965 (+)
G2165252 NA non-coding upstream 173443 22606957 ~ 22607172 (+)
G2165200 NA non-coding upstream 235528 22544882 ~ 22545087 (+)
G2165177 NA non-coding upstream 249967 22530417 ~ 22530648 (+)
G2165167 NA non-coding upstream 254636 22525692 ~ 22525979 (+)
G2165554 NA non-coding downstream 7445 22788276 ~ 22788483 (+)
G2165560 NA non-coding downstream 13370 22794201 ~ 22794471 (+)
G2165575 NA non-coding downstream 25113 22805944 ~ 22806281 (+)
G2165587 NA non-coding downstream 30746 22811577 ~ 22811786 (+)
G2165617 NA non-coding downstream 47969 22828800 ~ 22829022 (+)
G2163804 LOC106613263 other upstream 1179563 21600418 ~ 21601052 (+)
G2161678 NA other upstream 2982841 19795260 ~ 19797774 (+)
G2161635 LOC106563312 other upstream 3027872 19741814 ~ 19752743 (+)
LOC110509766 LOC106566689 other upstream 3164104 19609602 ~ 19616511 (+)
G2165628 LOC106563266 other downstream 56240 22837071 ~ 22841481 (+)
G2165973 LOC106563265 other downstream 344949 23125780 ~ 23134290 (+)
LOC110509837 LOC106563250 other downstream 1004788 23785060 ~ 23793640 (+)
LOC110509859 LOC106563234 other downstream 1719577 24500361 ~ 24532163 (+)

Expression


Co-expression Network