G2166344


Basic Information

Item Value
gene id G2166344
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 23380651 ~ 23380947 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2476197
gaccaggacAAGGGAGATGTGTGGTGGTGTTCAAAGGAAAGTAAGAGCTGTTGTCGCTGATAAAATAAGAGCCACCATCATAGACCATGTGATAAACCagggtctatcactgagagaggctggtgaaagGGGCGAcagggaagcctagtggttagagcgttggactagtaaccagaaggttgtaagctcaaatccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccgctgttcctaggccgtcattgaaaataagaatttgttcttaactgact

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2476197 True 297 lncRNA 0.47 1 23380651 23380947

Neighbor

gene id symbol gene type direction distance location
LOC110509823 LOC106563263 coding upstream 55287 23311636 ~ 23325364 (+)
trim32 LOC106563269 coding upstream 1390410 21985765 ~ 21990241 (+)
LOC118945260 NA coding upstream 1405671 21963673 ~ 21974980 (+)
pappaa LOC106563270 coding upstream 1505580 21749280 ~ 21875071 (+)
LOC110509813 LOC106563271 coding upstream 1671694 21670528 ~ 21708957 (+)
LOC110509824 LOC106563262 coding downstream 25056 23406003 ~ 23408940 (+)
LOC110509825 LOC106563261 coding downstream 30595 23399671 ~ 23465618 (+)
LOC110509345 LOC106563260 coding downstream 87453 23468400 ~ 23534217 (+)
LOC110509828 LOC106563258 coding downstream 173985 23554932 ~ 23569102 (+)
LOC110509829 LOC106563257 coding downstream 218495 23599442 ~ 23647056 (+)
G2166339 NA non-coding upstream 8346 23372100 ~ 23372305 (+)
G2166030 NA non-coding upstream 19437 23267880 ~ 23361214 (+)
G2166066 NA non-coding upstream 119291 23260168 ~ 23261360 (+)
G2166020 NA non-coding upstream 183766 23193035 ~ 23196885 (+)
G2166007 NA non-coding upstream 188710 23181983 ~ 23191941 (+)
G2166463 NA non-coding downstream 278177 23659124 ~ 23659329 (+)
G2166464 LOC100194703 non-coding downstream 278932 23659879 ~ 23660149 (+)
G2165973 LOC106563265 other upstream 246361 23125780 ~ 23134290 (+)
G2165628 LOC106563266 other upstream 539170 22837071 ~ 22841481 (+)
G2163804 LOC106613263 other upstream 1779599 21600418 ~ 21601052 (+)
LOC110509811 LOC106563272 other upstream 2159470 21160126 ~ 21389662 (+)
G2161678 NA other upstream 3582877 19795260 ~ 19797774 (+)
LOC110509837 LOC106563250 other downstream 404672 23785060 ~ 23793640 (+)
LOC110509859 LOC106563234 other downstream 1119461 24500361 ~ 24532163 (+)
LOC110509866 LOC106563223 other downstream 1818672 24944825 ~ 25202836 (+)
LOC110509876 LOC106563358 other downstream 3082354 26463263 ~ 26464615 (+)

Expression


Co-expression Network