G2167159 (LOC106563237)


Basic Information

Item Value
gene id G2167159
gene name LOC106563237
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 24347768 ~ 24353149 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2477112
TAGACTTCTTAATTGCATTAATTTAAtttgtcaataaaaaaaaaatacaatcagAAATGCATCTGGTGATACTGGTAACCTTGCATTTGTGACATGACAAGACCAATTTGTATAGCTGTGAATGATGCATCAGGGAGCCTGTGCTCAGTGAGAGCTTTCTCAGACGGAGGGCAGGCTGGGAAAAATGTTAGACCACCAGTTCACAAAGCGCACCCTCATCTTCTCATGGACGTAGTTCTTGTTCATTTGGGCATTGATCTCCAGGTATTTTTGCCCAGAGGTGGTGTATGCAGGCCAGGTCACAGGCACCTTCGACTCCCCGTTGTTGGGGTCTCTGTGGTGGGAAGGGGTTGATGGTAAGAAAAACATAATGGTGAGGACATTAGATATATATAGTTTTCGTGAGGATAACATCCCTTATACAGTAATCCCATCCAGTGGGGGAGACAAAAACATGATTGCATTGCAGCTCTTTTTTACCCAGTCCTGGCGAAGTTGGTCCAGTAGGCAATCAAGTATCTGGAGACGTCACGGTGGCTGGGCCAGTATGCCAGGGGCGTTGTGAAGGGCTTGCCGAACACATACTGCAGGTCATCAGCATGGTCAGCCTCCATCCAGCTGGGGTAAGgttgGACTATCCCGGCCATGCGGGCTCCGAAAaaacataaatggtttgtcgagatctagTTGGAAAAACTTGATTGgcggctattatagcagcaaaggggaaacCAACTCCATATCTCCAataaatattttacctttatataactaggcaagtcagtcagcctaggaacagtgggttagaataacagatttgtgccttgtcagctcgggggtttgaacttgcaaccttccggttactagtctaacgctctaaccactaggctaccctgccgccccaaataagatgttcgacgagcagatgtcaacatacttttggtcGTGTGGTGTATctctatattgttttatgtccCACGGATTCGTGAAGAAATATGAAAAATTAAACAGGAATGTGACCCTGCCAGGTAGCTTTCATTCATACATAGCACCCAGCCTAGCTAATGCGATGCTGTGCAATATTccttattttttatatattttttttctctttcctcCCTTGATTTGATCCTAATTTTggccatcctacaagggtaaaaacaTCAATGACTTTTGAATGGATGATGGTTTGGACCATTGGTTTTCTTAGAGGAGTTTCTACAAAATTGACACATTAttttacccattggtcaaaaTATGCATTTTTGATTGGATACCCTAGAGATAAGGCCCAACAGATATATCAACCCCTTCTGAATCTCACTGTGTTAGGGACCTGGCTGAACTGATAACCCTGTCCTTTATTATTTGATTCTACTTCTACTTGTTAGACTCAGTTGGTTCTGTAAAATCTGCAGTCCCATTTAAGCTACACCATCCACATGGCCAACACCGAACAGAGTGCCCTCTTCCTCCCAGGTAACCAATCAGCCCTCTTCCTCCCAGCCCATAGCATAGCCACTCACACGGGGACGTTTGCGCTTGGATTGTTGATATTGGGGATGTCCTGGCCAGCGAAGAGGTGGGCATCCATGCTGTTGACCCCGGCGAGGTAATCAATGTCAGCGGCGTTGTGGAACAGGTTACCTGGGTGATCAGGCAGGAAGTCCCCATCGATCACAGGGGAGAGGACCAGGTTGTCTACCATGGGggTGGAGGGAGAACCACCCAGGGCCGTGGTACCGGCCAGAGTGAGAACATTAGCGTCAACAAGTTTCAGGCAGGCCATCATCTGATCATCCTTGGGGCAGCCCACCTTCTCAGCAACCTAAAGAGACAGAAAGGGGGATGAGACATCCCTTTAACAGCCAATATCCCTCTCTGTCAGTCCATATTCTACCTCATTGTTACAGAAGTACACATACGTTCTCTGCAAAGGCACGGGGGTTCCTGTTGATAGCCCAGGGGCAGAGAGCAACACCACTCTGGGAGATTGCCCTGCGGATCAGCCCTTTGTTATGGGGAGAGAGTGTCTTTTTTAGTCCCACACCTGGAAGCTGGAGCTAACAGCGCCGGCAGACTCCCCGAAGATGGTGAGGTTGTTGGGGTCTCCTCCGAAGGCACGGATGTTCCTGTTTACCCAAGCAATGGCAGCGTGCTGGTCCCACAAACCATAGTTACCTGACATGGAAGACAGCTCTGTGAGCCAGCAGCAGTACTCTACCTACTAATTTCCCATGGGCAGATTCTGCATGtcagggccggctccaggcataaTCAGTCGCTTATGGAACTCAGTCTGGGGTCttaacttactgttgagagtttgATTAGTAGAATACATGAGGTGTGATTTCAAAATATTGATGTGCCTCAGcaatttttctcttgttatgtcagttactgacagtcactcaattagccatgtcagctaagaATGTattgattggtaagttagtctagacAGCTATCATTGCCGAATACTGATTAGGCATGCAGGGCATGTGCCCAGGGGACTTGACCttcagggggcccccattgattttgtttgtcgctctcactcagatatcattaaatAAATTAAGTTTTGGCTAAATGTGTAGAAATTCAGGAAATGTTAATTAAAACTGGGAAAAAAAGTCTCTCCACACCATGGCCAAATGGGTAGAGTTTCTTTTTGAGTTACCTTTTGCGAGGTTGGAGACTTTGTTTTTGATGGAAGTTTCCATttctaacacatacagtatggacACGAAGTTAAAGCAATCACGACGCTGGCCAAATTACTCAAGATTTTACTTCTGGGTTAAGAGAGATTATCTACctactaacatactgtacatctgCCTCCAACAGAATGGCTCAAGTTTCTGAAAGAGCCAGTTGATTACTAAAAGTTAAACAAACACAGTATTCTTAAACATTATTCTCATAAAGTGGATTCAGTCACCTGAGAATCAGTACATGAAGAAAAGATCAATgtcatacatcagctgatgtgaCACCGATTGTGCCACGGCCATTTACCCACCcacctagccagccagccagccagccagccaggcaaagCCTTGGTTGACACCTACCAGGTCCGCTGGCATCTCCAGAGCTGAGGAAGCCCAGGGTGCCCACACGATAACCCAGGGTCACCACGATTACATTGCCTCTGTTAGCAATCTCCTCCCCGTCATACAGATAGTTATCCAGGAAGTTTGCGCCCATAGAGCCACCAACCTGGAAACCACCTCCATAGAGCCACACCATTACTGGCAGACCAGTGGAGACTGAAAGAAAGGAGGGatatttcaatacatttgaagaATTACACCATATG
>TU2477113
TAGACTTCTTAATTGCATTAATTTAAtttgtcaataaaaaaaaaatacaatcagAAATGCATCTGGTGATACTGGTAACCTTGCATTTGTGACATGACAAGACCAATTTGTATAGCTGTGAATGATGCATCAGGGAGCCTGTGCTCAGTGAGAGCTTTCTCAGACGGAGGGCAGGCTGGGAAAAATGTTAGACCACCAGTTCACAAAGCGCACCCTCATCTTCTCATGGACGTAGTTCTTGTTCATTTGGGCATTGATCTCCAGGTATTTTTGCCCAGAGGTGGTGTATGCAGGCCAGGTCACAGGCACCTTCGACTCCCCGTTGTTGGGGTCTCTGTGGTGGGAAGGGGTTGATGGTAAGAAAAACATAATGGTGAGGACATTAGATATATATAGTTTTCGTGAGGATAACATCCCTTATACAGTAATCCCATCCAGTGGGGGAGACAAAAACATGATTGCATTGCAGCTCTTTTTTACCCAGTCCTGGCGAAGTTGGTCCAGTAGGCAATCAAGTATCTGGAGACGTCACGGTGGCTGGGCCAGTATGCCAGGGGCGTTGTGAAGGGCTTGCCGAACACATACTGCAGGTCATCAGCATGGTCAGCCTCCATCCAGCTGGGGTAAGGTTGGACTATCCCGGCCATGCGGCTGGGCTCCGAAAAGAGGTAGGAGTAGGTGCGTGCAGATTGGGTAGGAACCAGGAAGATGTAGTCAGTTTCGATCATAACAACGGTCTTCTTGATTGTCTTCTGGCTAGGCTCATCTCCCCAGTCAGCCGTGTACTCTGTGAAAGCGTTGTTTGTAGCGGCCTCTCCCTTCTTAGTCAAAGAACTCAAGAGCAGTTTCACGTCTGACACGGGGACGTTTGCGCTTGGATTGTTGATATTGGGGATGTCCTGGCCAGCGAAGAGGTGGGCATCCATGCTGTTGACCCCGGCGAGGTAATCAATGTCAGCGGCGTTGTGGAACAGGTTACCTGGGTGATCAGGCAGGAAGTCCCCATCGATCACAGGGGAGAGGACCAGGTTGTCTACCATGGGggTGGAGGGAGAACCACCCAGGGCCGTGGTACCGGCCAGAGTGAGAACATTAGCGTCAACAAGTTTCAGGCAGGCCATCATCTGATCATCCTTGGGGCAGCCCACCTTCTCAGCAACCTAAAGAGACAGAAAGGGGGATGAGACATCCCTTTAACAGCCAATATCCCTCTCTGTCAGTCCATATTCTACCTCATTGTTACAGAAGTACACATACGTTCTCTGCAAAGGCACGGGGGTTCCTGTTGATAGCCCAGGGGCAGAGAGCAACACCACTCTGGGAGATTGCCCTGCGGATCAGCCCTTTGTTATGGGGAGAGAGTGTCTTTTTTAGTCCCACACCTGGAAGCTGGAGCTAACAGCGCCGGCAGACTCCCCGAAGATGGTGAGGTTGTTGGGGTCTCCTCCGAAGGCACGGATGTTCCTGTTTACCCAAGCAATGGCAGCGTGCTGGTCCCACAAACCATAGTTACCTGACATGGAAGACAGCTCTGTGAGCCAGCAGCAGTACTCTACCTACTAATTTCCCATGGGCAGATTCTGCATGtcagggccggctccaggcataaTCAGTCGCTTATGGAACTCAGTCTGGGGTCttaacttactgttgagagtttgATTAGTAGAATACATGAGGTGTGATTTCAAAATATTGATGTGCCTCAGcaatttttctcttgttatgtcagttactgacagtcactcaattagccatgtcagctaagaATGTattgattggtaagttagtctagacAGCTATCATTGCCGAATACTGATTAGGCATGCAGGGCATGTGCCCAGGGGACTTGACCttcagggggcccccattgattttgtttgtcgctctcactcagatatcattaaatAAATTAAGTTTTGGCTAAATGTGTAGAAATTCAGGAAATGTTAATTAAAACTGGGAAAAAAAGTCTCTCCACACCATGGCCAAATGGGTAGAGTTTCTTTTTGAGTTACCTTTTGCGAGGTTGGAGACTTTGTTTTTGATGGAAGTTTCCATttctaacacatacagtatggacACGAAGTTAAAGCAATCACGACGCTGGCCAAATTACTCAAGATTTTACTTCTGGGTTAAGAGAGATTATCTACctactaacatactgtacatctgCCTCCAACAGAATGGCTCAAGTTTCTGAAAGAGCCAGTTGATTACTAAAAGTTAAACAAACACAGTATTCTTAAACATTATTCTCATAAAGTGGATTCAGTCACCTGAGAATCAGTACATGAAGAAAAGATCAATgtcatacatcagctgatgtgaCACCGATTGTGCCACGGCCATTTACCCACCcacctagccagccagccagccagccagccaggcaaagCCTTGGTTGACACCTACCAGGTCCGCTGGCATCTCCAGAGCTGAGGAAGCCCAGGGTGCCCACACGATAACCCAGGGTCACCACGATTACATTGCCTCTGTTAGCAATCTCCTCCCCGTCATACAGATAGTTATCCAGGAAGTTTGCGCCCATAGAGCCACCAACCTGGAAACCACCTCCATAGAGCCACACCATTACTGGCAGACCAGTGGAGACTGAAAGAAAGGAGGGatatttcaatacatttgaagaATTACACCATATG

Function

NR:

description
bile salt-activated lipase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2477112 False 3334 lncRNA 0.46 4 24347768 24353149
TU2477113 True 2666 lncRNA 0.48 5 24347768 24353149

Neighbor

gene id symbol gene type direction distance location
LOC110509844 LOC106563243 coding upstream 228886 24059336 ~ 24118882 (+)
LOC110509843 LOC106563244 coding upstream 301905 24042927 ~ 24045863 (+)
LOC110509842 LOC106563245 coding upstream 311991 23884122 ~ 24035777 (+)
LOC100301660 LOC106563362 coding upstream 494946 23851125 ~ 23852822 (+)
LOC110509839 fastkd5 coding upstream 519931 23824234 ~ 23827837 (+)
LOC110509856 LOC100380649 coding downstream 57149 24410298 ~ 24432688 (+)
LOC110509859 LOC106563234 coding downstream 147212 24500361 ~ 24532163 (+)
LOC110509861 LOC106563232 coding downstream 225456 24578605 ~ 24591900 (+)
si:ch211-114l13.9 LOC106563229 coding downstream 280152 24633301 ~ 24642099 (+)
LOC110509863 NA coding downstream 394194 24747343 ~ 24751800 (+)
G2167149 NA non-coding upstream 16453 24331075 ~ 24331315 (+)
G2167128 LOC106563238 non-coding upstream 39058 24307400 ~ 24308710 (+)
G2167096 NA non-coding upstream 109266 24238158 ~ 24238502 (+)
G2167089 phpt1 non-coding upstream 116083 24227421 ~ 24231685 (+)
G2167020 NA non-coding upstream 226115 24121342 ~ 24121653 (+)
G2167551 NA non-coding downstream 93804 24446953 ~ 24447307 (+)
G2167564 NA non-coding downstream 101609 24454758 ~ 24455033 (+)
G2167573 NA non-coding downstream 113590 24466739 ~ 24467053 (+)
G2167587 NA non-coding downstream 123629 24476778 ~ 24476999 (+)
G2167594 NA non-coding downstream 134237 24487386 ~ 24487589 (+)
LOC110509837 LOC106563250 other upstream 556104 23785060 ~ 23793640 (+)
LOC110509345 LOC106563260 other upstream 822437 23468400 ~ 23534217 (+)
G2165973 LOC106563265 other upstream 1213478 23125780 ~ 23134290 (+)
G2165628 LOC106563266 other upstream 1506287 22837071 ~ 22841481 (+)
G2163804 LOC106613263 other upstream 2746716 21600418 ~ 21601052 (+)
LOC110509866 LOC106563223 other downstream 846470 24944825 ~ 25202836 (+)
LOC110509876 LOC106563358 other downstream 2110152 26463263 ~ 26464615 (+)
LOC110509877 LOC106563217 other downstream 2175823 26504919 ~ 26532797 (+)
G2170458 LOC106563185 other downstream 2968956 27322105 ~ 27324765 (+)

Expression


Co-expression Network