Gene
RNA
| Item | Value |
|---|---|
| gene id | G2170077 |
| gene name | LOC106593572 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 26545150 ~ 26545493 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106593572 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2480215 | True | 344 | lncRNA | 0.45 | 1 | 26545150 | 26545493 |
26,544,000
26,544,400
26,544,800
26,545,200
26,545,600
26,546,000
26,546,400
26,546,400
26,546,800
26,547,200
26,547,600
26,548,000
26,548,400
26,548,800
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509877 | LOC106563217 | coding | upstream | 12353 | 26504919 ~ 26532797 (+) |
| LOC110509876 | LOC106563358 | coding | upstream | 80535 | 26463263 ~ 26464615 (+) |
| LOC110509874 | LOC106563218 | coding | upstream | 281247 | 26123905 ~ 26263903 (+) |
| LOC110509870 | LOC106563360 | coding | upstream | 973957 | 25567526 ~ 25571193 (+) |
| trnat-ugu-47 | NA | coding | upstream | 1399238 | 25145843 ~ 25145912 (+) |
| LOC110509878 | LOC106563216 | coding | downstream | 11311 | 26556804 ~ 26566726 (+) |
| LOC110509879 | LOC106563215 | coding | downstream | 23854 | 26569347 ~ 26699137 (+) |
| LOC110509881 | LOC106563214 | coding | downstream | 154280 | 26699773 ~ 26720454 (+) |
| LOC110509880 | LOC106563212 | coding | downstream | 175080 | 26720573 ~ 26730554 (+) |
| LOC110509887 | LOC106563206 | coding | downstream | 352457 | 26897950 ~ 26936831 (+) |
| G2169992 | NA | non-coding | upstream | 352 | 26544496 ~ 26544798 (+) |
| G2169865 | NA | non-coding | upstream | 154515 | 26390387 ~ 26390635 (+) |
| G2169839 | NA | non-coding | upstream | 176789 | 26368119 ~ 26368361 (+) |
| G2169807 | NA | non-coding | upstream | 196974 | 26347971 ~ 26348176 (+) |
| G2169803 | NA | non-coding | upstream | 200477 | 26344429 ~ 26344673 (+) |
| G2170078 | NA | non-coding | downstream | 344 | 26545837 ~ 26546045 (+) |
| G2170111 | NA | non-coding | downstream | 33903 | 26579396 ~ 26579675 (+) |
| G2170112 | NA | non-coding | downstream | 34323 | 26579816 ~ 26580127 (+) |
| G2170114 | NA | non-coding | downstream | 36180 | 26581673 ~ 26581947 (+) |
| G2170116 | NA | non-coding | downstream | 40889 | 26586382 ~ 26586606 (+) |
| LOC110509866 | LOC106563223 | other | upstream | 1342509 | 24944825 ~ 25202836 (+) |
| LOC110509859 | LOC106563234 | other | upstream | 2012996 | 24500361 ~ 24532163 (+) |
| LOC110509837 | LOC106563250 | other | upstream | 2753486 | 23785060 ~ 23793640 (+) |
| G2170458 | LOC106563185 | other | downstream | 776612 | 27322105 ~ 27324765 (+) |
| gigyf1b | LOC105024601 | other | downstream | 1757712 | 28277874 ~ 28313151 (+) |
| LOC110509373 | LOC106563396 | other | downstream | 2133355 | 28678848 ~ 28681351 (+) |
| G2173098 | NA | other | downstream | 3014077 | 29559570 ~ 29559959 (+) |
| G2173114 | NA | other | downstream | 3040101 | 29585594 ~ 29587472 (+) |
