G2170211


Basic Information

Item Value
gene id G2170211
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 26868624 ~ 26869912 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2480383
GGAGGCACTACATCATGGCAGCCAGGACAGATGTATGAGTATTTAATGAGCAGGGATGACACATGATAAAATGAGAGCATAGGCTGTGGGTGGCAGGCCTGAGTAACAGAAAATGTTCAATCACCGATTTGGTATGCAGGCGTGCATCAAAGAATGAGCACTCCTCCTGTTGACCTAGATCAAATCTGACAGCAGGCAtcgctctccatctctatctcttgCGCTCTCGATCTTCTCCCATCCTATCTCTCTGTTTGTCCCTACATCTCACTCACTTCCTCActgaaaaacatgtatttatgcATAAAAAGGATAATAATATTCAGAGTCCTCTAATTAGTAGACAGACAAGCAGATGATACAGCAGCACATGTGTGCCTCTCCCCCAAGTCCCTGAGATAGCATTGTGTTTGTGTAGATGAGGCTGATGAGATAATCAATGGCACCATTTCAAGTAACAATCATTCACTGGATGGATCTGGTTCGCTGTTATTGCTGTGCTATCCTCCTTTGCGTTAAGGCCTGTTCCACCACGGTTTGAATGTATAGCCCGACATCTAGTGGCCAAATATGAGAATAAGGTGAGTAAAGATGGAGGAATTTAGAtatgggtcgttccaccaattcagtgccttttgagaagtggaACTtagtaaaaaaatttaaaaataaaaataaaaatactaatGTTTTTGATTTCACCTAATTTTGGCATTCTGTCATAAATATCACATGTTCAACTTCAGAAAAAAACATGtcttcccatctcaagaggtaaATTTTTTTTTGTCACTTTAGCAAGCCTTTATTCGTAAATCTGATTTACTTAAttatccatgtggtctatattaagaGCACTTCATTTGATATAACAGATTTAAAACAATCTATATTGCTGCACAATTTCAACTTAAAATATCAAAAGTTATGCAACAGTATTACAGTTCTACAGTTAGGCAAAAATATatctgtcacgactcctaccgaaggtagCTCCctttcctgttcgggtggcgctcggcggtcgtcgtcaccggcctactagctgccactgatcccttttccccttttctgtttattggtttcacctgtgtttgTTTTAGGCTGATTGGTTGGGCTTTATTTACCAGCAGTTGTGTGCGGGATTATTCGATGTACATGTGTACACGTCTGTGTGTCACGGTTCtcccatgtgtttttttttttttgctggatTGTTTAAATcgcccgtgtttggggcatttgttttgatTGGCGTATGTTCACCGTTGTTGTGCATTCAAAGttag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106562530

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2480383 True 1289 lncRNA 0.40 1 26868624 26869912

Neighbor

gene id symbol gene type direction distance location
LOC110509880 LOC106563212 coding upstream 138070 26720573 ~ 26730554 (+)
LOC110509881 LOC106563214 coding upstream 148170 26699773 ~ 26720454 (+)
LOC110509879 LOC106563215 coding upstream 169487 26569347 ~ 26699137 (+)
LOC110509878 LOC106563216 coding upstream 301898 26556804 ~ 26566726 (+)
LOC110509877 LOC106563217 coding upstream 335827 26504919 ~ 26532797 (+)
LOC110509887 LOC106563206 coding downstream 28038 26897950 ~ 26936831 (+)
LOC110509890 LOC106563202 coding downstream 150315 27020227 ~ 27056214 (+)
LOC110509891 drg1 coding downstream 186669 27056581 ~ 27072987 (+)
LOC110509893 LOC106563198 coding downstream 243574 27113486 ~ 27132244 (+)
LOC110509895 fam136a coding downstream 275432 27145344 ~ 27147704 (+)
G2170251 NA non-coding upstream 5188 26863156 ~ 26863436 (+)
G2170175 NA non-coding upstream 71067 26758295 ~ 26797557 (+)
G2170155 NA non-coding upstream 213122 26655298 ~ 26655502 (+)
G2170151 NA non-coding upstream 219100 26649303 ~ 26649524 (+)
G2170147 NA non-coding upstream 232057 26636348 ~ 26636567 (+)
G2170255 NA non-coding downstream 9970 26879882 ~ 26880168 (+)
G2170287 NA non-coding downstream 80248 26950160 ~ 26953340 (+)
G2170289 NA non-coding downstream 85785 26955697 ~ 26968734 (+)
G2170292 NA non-coding downstream 102396 26972308 ~ 26972569 (+)
G2170373 NA non-coding downstream 212232 27082144 ~ 27084777 (+)
LOC110509876 LOC106563358 other upstream 404063 26463263 ~ 26464615 (+)
LOC110509866 LOC106563223 other upstream 1665983 24944825 ~ 25202836 (+)
LOC110509859 LOC106563234 other upstream 2336470 24500361 ~ 24532163 (+)
LOC110509837 LOC106563250 other upstream 3076960 23785060 ~ 23793640 (+)
G2170458 LOC106563185 other downstream 452193 27322105 ~ 27324765 (+)
gigyf1b LOC105024601 other downstream 1433293 28277874 ~ 28313151 (+)
LOC110509373 LOC106563396 other downstream 1808936 28678848 ~ 28681351 (+)
G2173098 NA other downstream 2689658 29559570 ~ 29559959 (+)
G2173114 NA other downstream 2715682 29585594 ~ 29587472 (+)

Expression


Co-expression Network