Gene
RNA
| Item | Value |
|---|---|
| gene id | G2171116 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 26870393 ~ 26871054 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: zinc finger protein 271-like isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2481420 | True | 662 | lncRNA | 0.49 | 1 | 26870393 | 26871054 |
26,867,600
26,868,000
26,868,400
26,868,800
26,869,200
26,869,600
26,870,000
26,870,400
26,870,800
26,871,200
26,871,600
26,872,000
26,872,400
26,872,800
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509886 | LOC106563207 | coding | downstream | 45304 | 26811904 ~ 26825089 (-) |
| LOC100136200 | LOC100136200 | coding | downstream | 77558 | 26789690 ~ 26792835 (-) |
| LOC110509885 | LOC106563210 | coding | downstream | 88296 | 26763281 ~ 26782097 (-) |
| LOC110509884 | LOC106563211 | coding | downstream | 113707 | 26747750 ~ 26756686 (-) |
| LOC110509882 | LOC106563213 | coding | downstream | 136986 | 26729762 ~ 26733407 (-) |
| 5ntc | 5ntc | coding | upstream | 84643 | 26955697 ~ 26968759 (-) |
| slc2a11l | LOC106563204 | coding | upstream | 99025 | 26970079 ~ 26988677 (-) |
| LOC110509889 | LOC106563201 | coding | upstream | 123981 | 26995035 ~ 27018448 (-) |
| LOC118945257 | NA | coding | upstream | 182345 | 27053399 ~ 27057267 (-) |
| LOC110509892 | LOC106563200 | coding | upstream | 211072 | 27082126 ~ 27099857 (-) |
| G2171115 | NA | non-coding | downstream | 132 | 26870039 ~ 26870261 (-) |
| G2171114 | NA | non-coding | downstream | 977 | 26866874 ~ 26869416 (-) |
| G2171112 | NA | non-coding | downstream | 6637 | 26863540 ~ 26863756 (-) |
| G2171111 | NA | non-coding | downstream | 6862 | 26863302 ~ 26863531 (-) |
| G2171073 | NA | non-coding | downstream | 78536 | 26791247 ~ 26791857 (-) |
| G2171117 | NA | non-coding | upstream | 429 | 26871483 ~ 26871829 (-) |
| G2171119 | NA | non-coding | upstream | 2364 | 26873418 ~ 26873641 (-) |
| G2171120 | LOC100846954 | non-coding | upstream | 5722 | 26876776 ~ 26878804 (-) |
| G2171128 | NA | non-coding | upstream | 23483 | 26894537 ~ 26894809 (-) |
| G2171131 | NA | non-coding | upstream | 26982 | 26898036 ~ 26898475 (-) |
| G2169325 | NA | other | downstream | 863521 | 26006141 ~ 26006872 (-) |
| LOC110509871 | LOC106563220 | other | downstream | 1279503 | 25584559 ~ 25607056 (-) |
| LOC110509868 | LOC106563221 | other | downstream | 1403481 | 25447869 ~ 25528834 (-) |
| G2167965 | LOC106563228 | other | downstream | 2000583 | 24847153 ~ 24869810 (-) |
| LOC110509858 | LOC106563233 | other | downstream | 2337243 | 24530156 ~ 24537449 (-) |
| G2171272 | NA | other | upstream | 323496 | 27193516 ~ 27196017 (-) |
| G2171531 | NA | other | upstream | 886929 | 27757983 ~ 27760702 (-) |
| G2171619 | NA | other | upstream | 1064400 | 27935454 ~ 27936813 (-) |
| LOC110509923 | LOC105024622 | other | upstream | 1385992 | 28256809 ~ 28265547 (-) |
| LOC110509931 | mpp1 | other | upstream | 1690108 | 28561162 ~ 28576997 (-) |
