G2170403


Basic Information

Item Value
gene id G2170403
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 27190067 ~ 27190382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2480591
tgggagagggattcacctttcagcaggacaataacctacaacacaaggccaaatctacactgaagttgcttacctaGAAGACAGtggatgttcctgagtggccaatatacagttttgacttaaatctgcttgaaaatctatggcaagacttgaacattGTGGTCTAGCCATGATCTTGACAGGGTTTGAAGAatcttttaaagaataatggaCCAATATTGCACAATtcaggtgtgaaaagctcttatagacttacccaagaagactcacagctgtaatcgatgccaaaggtgtttctaacatgcattgactaAGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2480591 True 316 lncRNA 0.40 1 27190067 27190382

Neighbor

gene id symbol gene type direction distance location
LOC110509897 LOC106563193 coding upstream 13133 27160500 ~ 27176934 (+)
LOC110509895 fam136a coding upstream 42363 27145344 ~ 27147704 (+)
LOC110509893 LOC106563198 coding upstream 57823 27113486 ~ 27132244 (+)
LOC110509891 drg1 coding upstream 117080 27056581 ~ 27072987 (+)
LOC110509890 LOC106563202 coding upstream 133853 27020227 ~ 27056214 (+)
sftpba LOC106563192 coding downstream 48301 27238683 ~ 27256779 (+)
LOC100136172 LOC100136172 coding downstream 304872 27495254 ~ 27499399 (+)
LOC118945286 NA coding downstream 395842 27586224 ~ 27586975 (+)
prp14 prp14 coding downstream 450596 27640978 ~ 27643345 (+)
LOC110509916 LOC106563177 coding downstream 518201 27708583 ~ 27758941 (+)
G2170346 NA non-coding upstream 3167 27182090 ~ 27186900 (+)
G2170373 NA non-coding upstream 105290 27082144 ~ 27084777 (+)
G2170292 NA non-coding upstream 217498 26972308 ~ 26972569 (+)
G2170289 NA non-coding upstream 221333 26955697 ~ 26968734 (+)
G2170287 NA non-coding upstream 236727 26950160 ~ 26953340 (+)
G2170405 NA non-coding downstream 4274 27194656 ~ 27196006 (+)
G2170458 LOC106563185 non-coding downstream 131723 27322105 ~ 27324765 (+)
G2170511 NA non-coding downstream 236002 27426384 ~ 27426620 (+)
G2170512 NA non-coding downstream 236656 27427038 ~ 27427561 (+)
G2170513 NA non-coding downstream 240476 27430858 ~ 27433701 (+)
LOC110509877 LOC106563217 other upstream 657287 26504919 ~ 26532797 (+)
LOC110509876 LOC106563358 other upstream 725506 26463263 ~ 26464615 (+)
LOC110509866 LOC106563223 other upstream 1987426 24944825 ~ 25202836 (+)
LOC110509859 LOC106563234 other upstream 2657913 24500361 ~ 24532163 (+)
LOC110509837 LOC106563250 other upstream 3398403 23785060 ~ 23793640 (+)
gigyf1b LOC105024601 other downstream 1112823 28277874 ~ 28313151 (+)
LOC110509373 LOC106563396 other downstream 1488466 28678848 ~ 28681351 (+)
G2173098 NA other downstream 2369188 29559570 ~ 29559959 (+)
G2173114 NA other downstream 2395212 29585594 ~ 29587472 (+)

Expression


Co-expression Network