Gene
RNA
| Item | Value |
|---|---|
| gene id | G2170556 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 27502086 ~ 27502345 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2480798 | True | 260 | lncRNA | 0.47 | 1 | 27502086 | 27502345 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100136172 | LOC100136172 | coding | upstream | 2687 | 27495254 ~ 27499399 (+) |
| sftpba | LOC106563192 | coding | upstream | 245307 | 27238683 ~ 27256779 (+) |
| LOC110509897 | LOC106563193 | coding | upstream | 325152 | 27160500 ~ 27176934 (+) |
| LOC110509895 | fam136a | coding | upstream | 354382 | 27145344 ~ 27147704 (+) |
| LOC110509893 | LOC106563198 | coding | upstream | 369842 | 27113486 ~ 27132244 (+) |
| LOC118945286 | NA | coding | downstream | 83879 | 27586224 ~ 27586975 (+) |
| prp14 | prp14 | coding | downstream | 138633 | 27640978 ~ 27643345 (+) |
| LOC110509916 | LOC106563177 | coding | downstream | 206238 | 27708583 ~ 27758941 (+) |
| LOC110509917 | npm | coding | downstream | 261190 | 27763535 ~ 27768291 (+) |
| LOC118945283 | LOC106563172 | coding | downstream | 389225 | 27891570 ~ 27894801 (+) |
| G2170527 | NA | non-coding | upstream | 23877 | 27446668 ~ 27478209 (+) |
| G2170514 | LOC106563181 | non-coding | upstream | 66260 | 27435378 ~ 27435826 (+) |
| G2170513 | NA | non-coding | upstream | 68385 | 27430858 ~ 27433701 (+) |
| G2170512 | NA | non-coding | upstream | 74525 | 27427038 ~ 27427561 (+) |
| G2170511 | NA | non-coding | upstream | 75466 | 27426384 ~ 27426620 (+) |
| G2170561 | NA | non-coding | downstream | 6624 | 27508969 ~ 27509205 (+) |
| G2170643 | NA | non-coding | downstream | 134766 | 27637111 ~ 27637329 (+) |
| G2170653 | NA | non-coding | downstream | 185585 | 27687930 ~ 27688168 (+) |
| G2170662 | NA | non-coding | downstream | 196579 | 27698924 ~ 27699194 (+) |
| G2170664 | NA | non-coding | downstream | 197592 | 27699937 ~ 27700137 (+) |
| G2170458 | LOC106563185 | other | upstream | 177321 | 27322105 ~ 27324765 (+) |
| LOC110509877 | LOC106563217 | other | upstream | 969306 | 26504919 ~ 26532797 (+) |
| LOC110509876 | LOC106563358 | other | upstream | 1037525 | 26463263 ~ 26464615 (+) |
| LOC110509866 | LOC106563223 | other | upstream | 2299445 | 24944825 ~ 25202836 (+) |
| LOC110509859 | LOC106563234 | other | upstream | 2969932 | 24500361 ~ 24532163 (+) |
| gigyf1b | LOC105024601 | other | downstream | 800860 | 28277874 ~ 28313151 (+) |
| LOC110509373 | LOC106563396 | other | downstream | 1176503 | 28678848 ~ 28681351 (+) |
| G2173098 | NA | other | downstream | 2057225 | 29559570 ~ 29559959 (+) |
| G2173114 | NA | other | downstream | 2083249 | 29585594 ~ 29587472 (+) |
| LOC110509970 | LOC106563483 | other | downstream | 2150224 | 29652518 ~ 29662236 (+) |
