G2170561


Basic Information

Item Value
gene id G2170561
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 27508969 ~ 27509205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2480803
attttgaacctgtaatcaaacccacaaatgctgatgctccagatactcagcaagtctaaagaagtccagttttattgcttctttaaccagcacaacatttttcagctgtgccaacataattgcaaatggaatttctaatgatcaattagcctttgaaaatgataaacttggactaactaacacaacgtgccattggaacacagtagtgatggttgctgataatgtgcctctgtactc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2480803 True 237 lncRNA 0.38 1 27508969 27509205

Neighbor

gene id symbol gene type direction distance location
LOC100136172 LOC100136172 coding upstream 9570 27495254 ~ 27499399 (+)
sftpba LOC106563192 coding upstream 252190 27238683 ~ 27256779 (+)
LOC110509897 LOC106563193 coding upstream 332035 27160500 ~ 27176934 (+)
LOC110509895 fam136a coding upstream 361265 27145344 ~ 27147704 (+)
LOC110509893 LOC106563198 coding upstream 376725 27113486 ~ 27132244 (+)
LOC118945286 NA coding downstream 77019 27586224 ~ 27586975 (+)
prp14 prp14 coding downstream 131773 27640978 ~ 27643345 (+)
LOC110509916 LOC106563177 coding downstream 199378 27708583 ~ 27758941 (+)
LOC110509917 npm coding downstream 254330 27763535 ~ 27768291 (+)
LOC118945283 LOC106563172 coding downstream 382365 27891570 ~ 27894801 (+)
G2170556 NA non-coding upstream 6624 27502086 ~ 27502345 (+)
G2170527 NA non-coding upstream 30760 27446668 ~ 27478209 (+)
G2170514 LOC106563181 non-coding upstream 73143 27435378 ~ 27435826 (+)
G2170513 NA non-coding upstream 75268 27430858 ~ 27433701 (+)
G2170512 NA non-coding upstream 81408 27427038 ~ 27427561 (+)
G2170643 NA non-coding downstream 127906 27637111 ~ 27637329 (+)
G2170653 NA non-coding downstream 178725 27687930 ~ 27688168 (+)
G2170662 NA non-coding downstream 189719 27698924 ~ 27699194 (+)
G2170664 NA non-coding downstream 190732 27699937 ~ 27700137 (+)
G2170458 LOC106563185 other upstream 184204 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 976189 26504919 ~ 26532797 (+)
LOC110509876 LOC106563358 other upstream 1044408 26463263 ~ 26464615 (+)
LOC110509866 LOC106563223 other upstream 2306328 24944825 ~ 25202836 (+)
LOC110509859 LOC106563234 other upstream 2976815 24500361 ~ 24532163 (+)
gigyf1b LOC105024601 other downstream 794000 28277874 ~ 28313151 (+)
LOC110509373 LOC106563396 other downstream 1169643 28678848 ~ 28681351 (+)
G2173098 NA other downstream 2050365 29559570 ~ 29559959 (+)
G2173114 NA other downstream 2076389 29585594 ~ 29587472 (+)
LOC110509970 LOC106563483 other downstream 2143364 29652518 ~ 29662236 (+)

Expression


Co-expression Network