G2170662


Basic Information

Item Value
gene id G2170662
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 27698924 ~ 27699194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2480919
attcgatgctaatgcagaacaccacaggatgtttttgtgctggtcaagggcagtcaagtctggggtgaaccaagggctatatctgttcttagttctacattttttgaacggggcatgcttatttaagatggtgaggaaagcactttgaagaataaccaggcatcctctactgatgggatgaggtcaatatccttccaggataacccgggccaggtcgattagaaagtcctgcttgctgaagtgttttagggaacgtttgacagtgatgagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2480919 True 271 lncRNA 0.45 1 27698924 27699194

Neighbor

gene id symbol gene type direction distance location
prp14 prp14 coding upstream 55579 27640978 ~ 27643345 (+)
LOC118945286 NA coding upstream 111949 27586224 ~ 27586975 (+)
LOC100136172 LOC100136172 coding upstream 199525 27495254 ~ 27499399 (+)
sftpba LOC106563192 coding upstream 442145 27238683 ~ 27256779 (+)
LOC110509897 LOC106563193 coding upstream 521990 27160500 ~ 27176934 (+)
LOC110509916 LOC106563177 coding downstream 9389 27708583 ~ 27758941 (+)
LOC110509917 npm coding downstream 64341 27763535 ~ 27768291 (+)
LOC118945283 LOC106563172 coding downstream 192376 27891570 ~ 27894801 (+)
LOC110509402 LOC106563375 coding downstream 468152 28164582 ~ 28256292 (+)
gigyf1b LOC105024601 coding downstream 578680 28277874 ~ 28313151 (+)
G2170653 NA non-coding upstream 10756 27687930 ~ 27688168 (+)
G2170643 NA non-coding upstream 61595 27637111 ~ 27637329 (+)
G2170561 NA non-coding upstream 189719 27508969 ~ 27509205 (+)
G2170556 NA non-coding upstream 196579 27502086 ~ 27502345 (+)
G2170527 NA non-coding upstream 220715 27446668 ~ 27478209 (+)
G2170664 NA non-coding downstream 743 27699937 ~ 27700137 (+)
G2170673 NA non-coding downstream 14660 27713854 ~ 27714073 (+)
G2170675 NA non-coding downstream 18274 27717468 ~ 27717723 (+)
G2170676 NA non-coding downstream 18888 27718082 ~ 27718376 (+)
G2170458 LOC106563185 other upstream 374159 27322105 ~ 27324765 (+)
LOC110509877 LOC106563217 other upstream 1166144 26504919 ~ 26532797 (+)
LOC110509876 LOC106563358 other upstream 1234363 26463263 ~ 26464615 (+)
LOC110509866 LOC106563223 other upstream 2496283 24944825 ~ 25202836 (+)
LOC110509859 LOC106563234 other upstream 3166770 24500361 ~ 24532163 (+)
LOC110509373 LOC106563396 other downstream 979654 28678848 ~ 28681351 (+)
G2173098 NA other downstream 1860376 29559570 ~ 29559959 (+)
G2173114 NA other downstream 1886400 29585594 ~ 29587472 (+)
LOC110509970 LOC106563483 other downstream 1953375 29652518 ~ 29662236 (+)

Expression


Co-expression Network