G2171531


Basic Information

Item Value
gene id G2171531
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 27757983 ~ 27760702 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2481898
ACATTTTATTGGTAGCATTTGCAATGTACAACAGAACATGAAAGCTTAAgctctctcctatctgtctgtcAAAGATAGAGTATTGTATGAGGTGAACCTCTTTGTTACATTTTATATTCAGATTGTTTTAAGCGCTGATTATCATTCATCATTATTTACCCCTTTGACACCTGAGGCAAAAATAATTGCAACatTTACAAACTCAACTATtcatgggtatgacgctacaagcttggcacacctatatttggggagtttctcccattcgtctctgcagatcctctcaagttctgtcaggttggatggggagcgtcgctgcacagctattttcaggtttctccagagatgttcaattgggttcaagtccaggctctggctggaccactcaaggacattcagagacttgtcccgaagccactcctgcattctcttggctatgtgcttatggtcattgtcctgatggaaggtgaaacttcgctccagtctgaggtcctgatgactgccaccaacatgcatcactgtaaggatggtgccaagtttcttcCAGGCGTGACACTtcgcattcaggctaaagagttccatcttggtttcataagaccagagaatcttgtttctcatggtctcagaGTTGTTAGGTGCCTtaaggcaaactccaagcaggctgtcatgtgcattttactgaggagtggcttccgtctggccactctaccataaaggcctgattggtggagttctgagagatggttgtccttctggaaggttctcccatctccacagagtaactctagagatttgtcagagtgaccattgggttcttggacacctccctgaccaaggcccttctccagcTCTCAGAtcgagtcttggtagttccaaacttcttcaatttaagaatgatggaggccactgtgttcttgggggccttcaatgctgcagacatattTTGGTTCCCTTCCTCAAATCTGTACTTTGACACAATATTGTCTCTGCGCTATACGGACAATTCCatcgacctcacggcttggtttttgctctaacacgCACCGTCAACTGTGaaaacttatatagacaggtgtgtgccattccaaattatgtccaatcaattgaatttaccacaggtggactccaatcaagtcgtagaaacagctcaaggatgatcaatggaaacaggatgcaccttagctcaatttcgagtctcatagcaaagggtctgaatacctatgtaaataaaggtatttctattttttatatttaataaattagaaaacatttctagaaacctatttttgctttgtcattatggggtattgtgtgtagattgacgagacaaataatttaattaattttagaataaggctgtaacacaagaaaatgtggaaaaggggaaggggtctgaatactttccgaatgcactgtatctatttGCCATAATGTACACTGAGGAGGAACTGACAAAGTCAGCACAAATTAGTAATTCGTTGAAGAAAAATTATAGTTGTTTCACATTAGAAGAATGTTGGTTTTGTCCTGTGATGAGTTTGGGGGTTTAGCTTAACTCCTGTATCCCTCACTACACACTTCAACAGACAAGTCAAAACACCAATGACCAACACCTTTCACGTTGCGTTACTCAGATGTTCATCTTCTATCATTAGTTTGATTCAGCCATCATACAAGAGGATGTATCATCAGTCATAAACCAAGTCTATTAGGTGTATTTATAAGCATACAGTAGAACAGGCATCAGGACAGACACAATTACAAGGATAGACAGGAGTGCGACAGCCAAGCCAACAGAGGTACAGAGGTCACCACGACAACAGTGAAACAGAAACAACaattaaaacaaacaaataatacATTAGGACAACCTCATATTTTTCGAGCATAAACACATTAATAAATAAGCAGATATGTAGATCATAGCTATCGATAAATCAATCACTGAATGAATGAGTTTAAAGGTCCAAGTCCTGGACAAACAAATGGTTGGTAGGGCGCATAGACGTAGAATcatgattctatttctatggtaggGAGGGAAGAATCCCTCTGGCTCAAGCATGCATCTATTTTGGCAAAAAGAACAGAGTCAAAAGAACCCAAAGTATCCCGGCGTAGTTTCAGTGTTTGACAGGTAGGGGTCAGGAGTCTTTCAGGAGTTTCCACATAGGCCTAATTGGGGAGCAGCGTATGGGTTTGAGTTTTCTCAGCTGTATCCCACTGCAGTCTATATTGTATGATCATCTGATTTACAAACCTTTATGTCACATAAAAAGGCAGAAAGCATTTTCCAGGTAATTCGTTTGCATACTCCCAGGCTCAGCAATATGACTAGCAAGTCCAGGGTTCTCTCAGCGGTTCTGGCTTCATCTGATCCATACCCAGGCAggtagccaggcagagacattaTTTGGCAAACACATGAATGCTGACAAGTtagatgagaggatgagagagattgATATACATCCACATTCATCCACTCTGACAGACACGCACGGATAAACAAACGTGTGGACACACGCACATGCGCACATGAACTCACACGAatgcactgaaacacacacaatctctctcattatctaattctctccttccttccatcggCTCCTTTTTTACATCACATTTTCGAAGAGCTGCATGGATCTCATCATC

Function

NR:

description
PREDICTED: zinc finger protein 271-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2481898 True 2658 TUCP 0.42 2 27757983 27760702

Neighbor

gene id symbol gene type direction distance location
LOC100135999 LOC100135999 coding downstream 165505 27589793 ~ 27592478 (-)
LOC110509398 NA coding downstream 183805 27570805 ~ 27574178 (-)
LOC110509914 LOC106563355 coding downstream 194473 27525223 ~ 27563510 (-)
LOC118945271 NA coding downstream 255644 27498447 ~ 27502339 (-)
LOC110509913 LOC106563180 coding downstream 267493 27467046 ~ 27490490 (-)
tlx3b LOC106563176 coding upstream 20578 27781280 ~ 27788453 (-)
ugt5g2 NA coding upstream 59501 27820027 ~ 27822177 (-)
LOC110509919 LOC106563174 coding upstream 62903 27823605 ~ 27839678 (-)
LOC110509400 NA coding upstream 83098 27843800 ~ 27849955 (-)
LOC110509920 NA coding upstream 105002 27865704 ~ 27890289 (-)
G2171510 NA non-coding downstream 36211 27721513 ~ 27721772 (-)
G2171503 NA non-coding downstream 43572 27714191 ~ 27714411 (-)
G2171489 NA non-coding downstream 58855 27698925 ~ 27699128 (-)
G2171447 NA non-coding downstream 147279 27566000 ~ 27610704 (-)
G2171429 NA non-coding downstream 200733 27518478 ~ 27557250 (-)
G2171570 NA non-coding upstream 67562 27828264 ~ 27828617 (-)
G2171577 NA non-coding upstream 72661 27833363 ~ 27834100 (-)
G2171623 NA non-coding upstream 141033 27901735 ~ 27902795 (-)
G2171638 NA non-coding upstream 162755 27923457 ~ 27923659 (-)
G2171272 NA other downstream 561966 27193516 ~ 27196017 (-)
G2169325 NA other downstream 1751111 26006141 ~ 26006872 (-)
LOC110509871 LOC106563220 other downstream 2167093 25584559 ~ 25607056 (-)
LOC110509868 LOC106563221 other downstream 2291071 25447869 ~ 25528834 (-)
G2167965 LOC106563228 other downstream 2888173 24847153 ~ 24869810 (-)
G2171619 NA other upstream 174752 27935454 ~ 27936813 (-)
LOC110509923 LOC105024622 other upstream 496344 28256809 ~ 28265547 (-)
LOC110509931 mpp1 other upstream 800460 28561162 ~ 28576997 (-)
G2172414 NA other upstream 1059048 28819750 ~ 28820509 (-)
G2173258 LOC106563498 other upstream 1664021 29424723 ~ 29427867 (-)

Expression


Co-expression Network