Gene
RNA
| Item | Value |
|---|---|
| gene id | G2172432 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 28959987 ~ 28979045 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2482918 | True | 1874 | lncRNA | 0.39 | 3 | 28959987 | 28979045 |
28,944,000
28,948,000
28,952,000
28,956,000
28,960,000
28,964,000
28,964,000
28,968,000
28,972,000
28,976,000
28,980,000
28,984,000
NC_048593.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509373 | LOC106563396 | coding | upstream | 278636 | 28678848 ~ 28681351 (+) |
| LOC118945687 | NA | coding | upstream | 328455 | 28631455 ~ 28631532 (+) |
| LOC118945694 | NA | coding | upstream | 329045 | 28630810 ~ 28630942 (+) |
| LOC118945700 | NA | coding | upstream | 329668 | 28630135 ~ 28630319 (+) |
| LOC118945688 | NA | coding | upstream | 331476 | 28628432 ~ 28628511 (+) |
| cmc4 | cmc4 | coding | downstream | 119229 | 29098274 ~ 29099084 (+) |
| LOC110509944 | LOC106603168 | coding | downstream | 150817 | 29129862 ~ 29173579 (+) |
| LOC110509953 | dipa | coding | downstream | 300303 | 29279348 ~ 29280885 (+) |
| LOC110509956 | LOC106563505 | coding | downstream | 307353 | 29286398 ~ 29290760 (+) |
| LOC110509954 | LOC106563504 | coding | downstream | 311923 | 29290968 ~ 29298599 (+) |
| G2172502 | NA | non-coding | upstream | 31272 | 28927875 ~ 28928715 (+) |
| G2172501 | NA | non-coding | upstream | 31856 | 28927561 ~ 28928131 (+) |
| G2172497 | NA | non-coding | upstream | 40003 | 28919570 ~ 28919984 (+) |
| G2172416 | NA | non-coding | upstream | 134461 | 28825309 ~ 28825526 (+) |
| G2172396 | NA | non-coding | upstream | 149703 | 28809980 ~ 28810284 (+) |
| G2172765 | NA | non-coding | downstream | 125902 | 29104947 ~ 29105482 (+) |
| G2172897 | NA | non-coding | downstream | 257743 | 29236788 ~ 29237068 (+) |
| G2172923 | NA | non-coding | downstream | 258625 | 29237670 ~ 29238540 (+) |
| G2172940 | NA | non-coding | downstream | 290762 | 29269807 ~ 29270188 (+) |
| gigyf1b | LOC105024601 | other | upstream | 646836 | 28277874 ~ 28313151 (+) |
| G2170458 | LOC106563185 | other | upstream | 1635222 | 27322105 ~ 27324765 (+) |
| LOC110509877 | LOC106563217 | other | upstream | 2427207 | 26504919 ~ 26532797 (+) |
| LOC110509876 | LOC106563358 | other | upstream | 2495426 | 26463263 ~ 26464615 (+) |
| G2173098 | NA | other | downstream | 580525 | 29559570 ~ 29559959 (+) |
| G2173114 | NA | other | downstream | 606549 | 29585594 ~ 29587472 (+) |
| LOC110509970 | LOC106563483 | other | downstream | 673524 | 29652518 ~ 29662236 (+) |
| LOC110509988 | tmem261 | other | downstream | 890093 | 29869091 ~ 29874237 (+) |
| G2173551 | vps51 | other | downstream | 915049 | 29894094 ~ 29896279 (+) |
