G2173428


Basic Information

Item Value
gene id G2173428
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29788453 ~ 29788751 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2484038
gtatccgctatgggtccgcggtcaaacgaccacccctcatcactgtcaaacgctccctaaaacacttctgcgagcaggcctttctaatcgacctggcccgggtatcctggaaggatattgacctcatcccatcagtcaaggatgcctggtcgttctttaaaagtaatttcctcaccatcttaaataagcatgcccctttcaaaaaatgtagaactaataacagatatagcccttggttcactccagacctgactgccctcgaccagcacaaaaacatcctgtggcggactgcgctggca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2484038 True 299 lncRNA 0.49 1 29788453 29788751

Neighbor

gene id symbol gene type direction distance location
LOC110509406 NA coding upstream 47784 29739663 ~ 29740669 (+)
LOC110509974 nxf1 coding upstream 90514 29677784 ~ 29697939 (+)
LOC110509973 LOC106563482 coding upstream 113367 29666670 ~ 29675086 (+)
LOC110509970 LOC106563483 coding upstream 126217 29652518 ~ 29662236 (+)
LOC110509969 LOC106563485 coding upstream 142982 29638568 ~ 29645471 (+)
LOC118945359 LOC106590264 coding downstream 33689 29822440 ~ 29825694 (+)
cnih2 LOC106563472 coding downstream 55469 29844220 ~ 29859442 (+)
LOC110509988 tmem261 coding downstream 80340 29869091 ~ 29874237 (+)
znhit2 znhit2 coding downstream 97538 29886289 ~ 29888742 (+)
LOC110509993 slc25a45 coding downstream 126106 29914857 ~ 29925677 (+)
G2173426 NA non-coding upstream 1092 29787031 ~ 29787361 (+)
G2173422 NA non-coding upstream 4875 29783265 ~ 29783578 (+)
G2173420 NA non-coding upstream 12675 29774287 ~ 29775778 (+)
G2173417 NA non-coding upstream 21454 29765515 ~ 29766999 (+)
G2173408 NA non-coding upstream 33104 29755057 ~ 29755349 (+)
G2173546 NA non-coding downstream 39021 29827772 ~ 29828005 (+)
G2173548 NA non-coding downstream 40060 29828811 ~ 29829051 (+)
G2173554 NA non-coding downstream 43143 29831894 ~ 29836082 (+)
G2173555 NA non-coding downstream 47390 29836141 ~ 29836501 (+)
G2173114 NA other upstream 200981 29585594 ~ 29587472 (+)
G2173098 NA other upstream 228494 29559570 ~ 29559959 (+)
LOC110509373 LOC106563396 other upstream 1108776 28678848 ~ 28681351 (+)
gigyf1b LOC105024601 other upstream 1475302 28277874 ~ 28313151 (+)
G2173551 vps51 other downstream 105343 29894094 ~ 29896279 (+)
LOC110509998 LOC106563463 other downstream 163786 29952492 ~ 29956193 (+)
G2173675 NA other downstream 347972 30136723 ~ 30137320 (+)
G2173754 LOC106563449 other downstream 530897 30319648 ~ 30323615 (+)

Expression


Co-expression Network