G2174100


Basic Information

Item Value
gene id G2174100
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 29975363 ~ 29977567 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2484822
TGTAATAAAGTGCTGTGTTTGTCATATTGCTGAGGGTTACATAGCAGAGCATTGAATCTTTCTACAGTCAGCTTTACATTGCTGTTAGTCTTTTACTCAAAATGTAACATGTGCTTTTtaaaatattccccaaaatgtaaaatgttcataTAATTCTATCCCTTAGTAATTGGAGATATCTTTGCATTGTTAAGTGTCAACCATAATATTGTTGTGGTATTAACTGAGAGAACACTGCATTGGTGAGGTGGAAATAACCATGCATAGCAACCCCGAGTTATAAAATACAAAATTACAATAATGTGTTTTTTATTTCTCCTTTGGGGAGTATATGTAATTGATTAAACATCAAAAACCCAATTTAATCATGGATAATTGTGGAGGGCTTGGGTTTGGGATGAGGTTAATGTGATTAATGTGTGCctctattttttttgtgtgtgtgtgtgtgtgtgtgtctgtgaagtgctagggcaaaaatcaaaacgtgcaccccttggggtccccaggaccgagtttgggaaacactgcattTAGGGGTAAAACATTAAACACAGAAAAATATCAGCATTAAAATGGATTGTGATGTCAAAGAAATACCAGATTAATTGATCAGTGTCTAGTTAGATTATTTATCACCCAATAAAATGCCACGTTTGTCCCCTACACCACCCTGTCTGAAACATTTAGATTTCTCCACTTTATCTGGCGGGGGTCGCCTAAGCTTCAGTGTCTTCACTGCCCACCTGGTTCAGCTGAAGGAAAACCAGTACAGGAGTCACATACTCCATGATCGTCTCCTTCACCCCTTTCTCCAGCAGGTAGCCCTCAGTCTCAATCTCAGTGTTCTCCTGCCCTGCCAACGCTTCCATGGTTGTCTGCAGGTATCGCAGACTTACCAGCACAGATGACTGcagcaggaagacagacaggacCCCAGCACCAATAGTGTTCATCAGGCCCATGTAGTAGTTGACTAGAGCTTCCCTGCAGCCGCGGATGTAGATGTTGAGCTCCTCGGTCTGGTGCTCATAGCTGTAGTGGGCTGAGTTGTTGGTGAGGCGGTCCTGGATGCAGGGTCTTGGGGAACTGGGGTTGCAGCAGCTGAAAGGGACCCCATCAAACAGGTAACGCCCATCCACATTGCTCTTAACACggTCCTTCACTTCCTTAGAGCTAAAGTCTAGGTAGCGGTTGCTGATCCACTGGACCTCGAACCAGTCCTTGAAGTCGGTGTTTCCGCAGCAACGGAACTCCATCTGCAGGCGGTCAATGTTCTGCTTCTGGAAGCAGCGGCCGGGGGTATCTGTGTCCTTGTAGAAGCGGATGCCGTTCTTCAGGCCAATCTTCAGGGAGGACTCCAGGTTCCCCTTCATGGCATAGCTCATGATCACAGCCATCAACATGAGCAGGGTGAAGAGGAGGGAAACACCCCAGTAGGGTTGCATGAAGGTTTTCCAGCGGGGAAAGCGTCCGGCATCCAGCGCATCCTGGCACATACGGCCTGCGAAGTAGTTGATACCCAGAGAGGCCAGACCCACTATCATCAGGGTGTTGGGCACAGCATGGATCTCTG
>TU2484823
TGTAATAAAGTGCTGTGTTTGTCATATTGCTGAGGGTTACATAGCAGAGCATTGAATCTTTCTACAGTCAGCTTTACATTGCTGTTAGTCTTTTACTCAAAATGTAACATGTGCTTTTtaaaatattccccaaaatgtaaaatgttcataTAATTCTATCCCTTAGTAATTGGAGATATCTTTGCATTGTTAAGTGTCAACCATAATATTGTTGTGGTATTAACTGAGAGAACACTGCATTGGTGAGGTGGAAATAACCATGCATAGCAACCCCGAGTTATAAAATACAAAATTACAATAATGTGTTTTTTATTTCTCCTTTGGGGAGTATATGTAATTGATTAAACATCAAAAACCCAATTTAATCATGGATAATTGTGGAGGGCTTGGGTTTGGGATGAGGTTAATGTGATTAATGTGTGCctctattttgtgtgtgtgtgtgtgtgtgcagtcatgGATACCTAAGACTGGGGTGCATTGTCCCCGGACAACTGATACAAAAATATATTAGCCCTCAGGTGACTGAAATAGATTACAACATTCGTGTCACTCGTTTAGGCAGAATTTCTCAAACTCTTTGCCCTAGCACTCCACAGctaattcaaataatcaaagcttgataatgagttcattatttgaatcagctgtgaagtgctagggcaaaaatcaaaacgtgcaccccttggggtccccaggaccgagtttgggaaacactgcattTAGGGGTAAAACATTAAACACAGAAAAATATCAGCATTAAAATGGATTGTGATGTCAAAGAAATACCAGATTAATTGATCAGTGTCTAGTTAGATTATTTATCACCCAATAAAATGCCACGTTTGTCCCCTACACCACCCTGTCTGAAACATTTAGATTTCTCCACTTTATCTGGCGGGGGTCGCCTAAGCTTCAGTGTCTTCACTGCCCACCTGGTTCAGCTGAAGGAAAACCAGTACAGGAGTCACATACTCCATGATCGTCTCCTTCACCCCTTTCTCCAGCAGGTAGCCCTCAGTCTCAATCTCAGTGTTCTCCTGCCCTGCCAACGCTTCCATGGTTGTCTGCAGGTATCGCAGACTTACCAGCACAGATGACTGcagcaggaagacagacaggacCCCAGCACCAATAGTGTTCATCAGGCCCATGTAGTAGTTGACTAGAGCTTCCCTGCAGCCGCGGATGTAGATGTTGAGCTCCTCGGTCTGGTGCTCATAGCTGTAGTGGGCTGAGTTGTTGGTGAGGCGGTCCTGGATGCAGGGTCTTGGGGAACTGGGGTTGCAGCAGCTGAAAGGGACCCCATCAAACAGGTAACGCCCATCCACATTGCTCTTAACACggTCCTTCACTTCCTTAGAGCTAAAGTCTAGGTAGCGGTTGCTGATCCACTGGACCTCGAACCAGTCCTTGAAGTCGGTGTTTCCGCAGCAACGGAACTCCATCTGCAGGCGGTCAATGTTCTGCTTCTGGAAGCAGCGGCCGGGGGTATCTGTGTCCTTGTAGAAGCGGATGCCGTTCTTCAGGCCAATCTTCAGGGAGGACTCCAGGTTCCCCTTCATGGCATAGCTCATGATCACAGCCATCAACATGAGCAGGGTGAAGAGGAGGGAAACACCCCAGTAGGGTTGCATGAAGGTTTTCCAGCGGGGAAAGCGTCCGGCATCCAGCGCATCCTGGCACATACGGCCTGCGAAGTAGTTGATACCCAGAGAGGCCAGACCCACTATCATCAGGGTGTTGGGCACAGCATGGATCTCTG

Function

NR:

description
RDS/peripherin-like protein xRDS35

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2484822 False 1576 TUCP 0.46 4 29975363 29977567
TU2484823 True 1765 lncRNA 0.46 4 29975363 29977567

Neighbor

gene id symbol gene type direction distance location
LOC110509997 zfpl1 coding downstream 26110 29946000 ~ 29949253 (-)
zgc:171967 ganab coding downstream 38806 29926209 ~ 29936557 (-)
LOC110509991 LOC106563469 coding downstream 64997 29901166 ~ 29910366 (-)
LOC110509989 vps51 coding downstream 74239 29894065 ~ 29901124 (-)
LOC110509992 tm7sf2 coding downstream 82358 29889063 ~ 29893005 (-)
LOC118945270 LOC106563461 coding upstream 21657 29998078 ~ 30003264 (-)
LOC110510006 LOC106563455 coding upstream 169761 30147328 ~ 30151742 (-)
LOC110510007 NA coding upstream 174712 30152279 ~ 30154243 (-)
LOC110510010 requ coding upstream 324495 30299615 ~ 30312873 (-)
LOC110510011 LOC106563449 coding upstream 342119 30319685 ~ 30332728 (-)
G2174122 NA non-coding downstream 1898 29973202 ~ 29973465 (-)
G2174121 NA non-coding downstream 2537 29972526 ~ 29972826 (-)
G2174120 NA non-coding downstream 4825 29968980 ~ 29970538 (-)
G2174119 NA non-coding downstream 6558 29968498 ~ 29968805 (-)
G2174118 NA non-coding downstream 8823 29966337 ~ 29966540 (-)
G2174126 NA non-coding upstream 425 29977992 ~ 29978265 (-)
G2174188 NA non-coding upstream 98779 30076346 ~ 30076790 (-)
G2174189 NA non-coding upstream 105547 30083114 ~ 30083526 (-)
G2174190 NA non-coding upstream 113245 30090812 ~ 30091091 (-)
G2174066 NA other downstream 29945 29944465 ~ 29945418 (-)
G2173258 LOC106563498 other downstream 547496 29424723 ~ 29427867 (-)
G2172414 NA other downstream 1154854 28819750 ~ 28820509 (-)
LOC110509931 mpp1 other downstream 1398398 28561162 ~ 28576997 (-)
LOC110509923 LOC105024622 other downstream 1712574 28256809 ~ 28265547 (-)
G2174463 NA other upstream 695023 30672590 ~ 30673101 (-)
G2174894 NA other upstream 1026188 31003755 ~ 31006435 (-)
G2175135 NA other upstream 1542485 31520052 ~ 31521188 (-)
G2175418 LOC106563537 other upstream 1624882 31602449 ~ 31688677 (-)

Expression

G2174100 Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 1.
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G2174100 Expression in each Bioproject

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G2174100 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 200.
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Co-expression Network