Gene
RNA
| Item | Value |
|---|---|
| gene id | G2173614 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 29983324 ~ 29995153 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Tc1-like transporase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2484247 | True | 449 | lncRNA | 0.44 | 2 | 29983324 | 29995153 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509374 | LOC106563556 | coding | upstream | 5733 | 29973566 ~ 29977591 (+) |
| LOC110509998 | LOC106563463 | coding | upstream | 27131 | 29952492 ~ 29956193 (+) |
| LOC110509996 | LOC106563468 | coding | upstream | 42339 | 29940307 ~ 29940985 (+) |
| LOC110509993 | slc25a45 | coding | upstream | 57647 | 29914857 ~ 29925677 (+) |
| znhit2 | znhit2 | coding | upstream | 94582 | 29886289 ~ 29888742 (+) |
| LOC110510000 | LOC106563458 | coding | downstream | 55035 | 30050188 ~ 30107503 (+) |
| LOC110510005 | LOC106563457 | coding | downstream | 125364 | 30120517 ~ 30127527 (+) |
| LOC110510002 | LOC106563456 | coding | downstream | 134365 | 30129518 ~ 30135940 (+) |
| LOC110510004 | LOC106563454 | coding | downstream | 144190 | 30139343 ~ 30147325 (+) |
| zmp:0000001168 | LOC106563451 | coding | downstream | 180351 | 30175504 ~ 30222113 (+) |
| G2173603 | NA | non-coding | upstream | 12752 | 29969184 ~ 29970572 (+) |
| G2173553 | NA | non-coding | upstream | 90900 | 29891987 ~ 29892424 (+) |
| G2173581 | NA | non-coding | upstream | 103089 | 29879952 ~ 29880235 (+) |
| G2173580 | NA | non-coding | upstream | 103849 | 29879208 ~ 29879475 (+) |
| G2173570 | NA | non-coding | upstream | 104626 | 29877775 ~ 29878698 (+) |
| G2173611 | NA | non-coding | downstream | 4607 | 29999760 ~ 30000561 (+) |
| LOC110509999 | LOC106563461 | non-coding | downstream | 10910 | 29978474 ~ 30007461 (+) |
| G2173621 | NA | non-coding | downstream | 16097 | 30011250 ~ 30011476 (+) |
| G2173622 | NA | non-coding | downstream | 17860 | 30013013 ~ 30054351 (+) |
| G2173641 | NA | non-coding | downstream | 52819 | 30047972 ~ 30048401 (+) |
| G2173551 | vps51 | other | upstream | 87045 | 29894094 ~ 29896279 (+) |
| LOC110509988 | tmem261 | other | upstream | 112007 | 29869091 ~ 29874237 (+) |
| LOC110509970 | LOC106563483 | other | upstream | 321090 | 29652518 ~ 29662236 (+) |
| G2173114 | NA | other | upstream | 395852 | 29585594 ~ 29587472 (+) |
| G2173675 | NA | other | downstream | 141570 | 30136723 ~ 30137320 (+) |
| G2173754 | LOC106563449 | other | downstream | 324495 | 30319648 ~ 30323615 (+) |
| G2173761 | LOC106563448 | other | downstream | 341699 | 30336852 ~ 30355090 (+) |
| G2173841 | LOC106563447 | other | downstream | 468789 | 30463942 ~ 30468124 (+) |
| LOC110510022 | LOC106563433 | other | downstream | 827461 | 30817845 ~ 30824144 (+) |
