G2174369



Basic Information


Item Value
gene id G2174369
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 30511419 ~ 30511675 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2485188
gtccaacatcagtgcccaacctcactagtactcttatggctgaatggaagcaagtccccacagcaatgttctaacatctattggaaagccttcccagaagagggtaggctgttatcgcagcaaaagggggacaaactccatattaatgcccatgatttttcaCGAGCTGCTGTCCACATACATTTTCTCATGTATGTGTTGTGGTTAATGCCATTCATTTGGAATGATTTGAAACATTTGAATATCTGTGTGCTTAC

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2485188 True 257 lncRNA 0.42 1 30511419 30511675

Neighbor


gene id symbol gene type direction distance location
LOC110510013 LOC106563447 coding downstream 8257 30456185 ~ 30503162 (-)
LOC110510012 LOC106563448 coding downstream 73876 30336845 ~ 30437543 (-)
LOC110510011 LOC106563449 coding downstream 178691 30319685 ~ 30332728 (-)
LOC110510010 requ coding downstream 198546 30299615 ~ 30312873 (-)
LOC110510007 NA coding downstream 357176 30152279 ~ 30154243 (-)
LOC110510015 LOC106563445 coding upstream 15490 30527165 ~ 30535371 (-)
LOC110510017 LOC106563443 coding upstream 37540 30549215 ~ 30551296 (-)
klhl13 LOC106563441 coding upstream 63718 30575393 ~ 30651448 (-)
LOC110510021 LOC106563440 coding upstream 157917 30669592 ~ 30681307 (-)
LOC110510023 tmm47 coding upstream 334167 30845842 ~ 30863487 (-)
si:ch1073-224n8.1 LOC106563446 non-coding downstream 1719 30449003 ~ 30514069 (-)
G2174338 NA non-coding downstream 65964 30445204 ~ 30445455 (-)
G2174273 NA non-coding downstream 193719 30314108 ~ 30317700 (-)
G2174380 NA non-coding upstream 19598 30531273 ~ 30616223 (-)
G2174388 NA non-coding upstream 34381 30546056 ~ 30546297 (-)
G2174391 NA non-coding upstream 42008 30553683 ~ 30556812 (-)
G2174414 NA non-coding upstream 75123 30586798 ~ 30588133 (-)
G2174418 NA non-coding upstream 89145 30600820 ~ 30601213 (-)
G2174100 NA other downstream 533852 29975363 ~ 29977567 (-)
G2174066 NA other downstream 566001 29944465 ~ 29945418 (-)
G2173258 LOC106563498 other downstream 1083552 29424723 ~ 29427867 (-)
G2172414 NA other downstream 1690910 28819750 ~ 28820509 (-)
G2174463 NA other upstream 160915 30672590 ~ 30673101 (-)
G2174894 NA other upstream 492080 31003755 ~ 31006435 (-)
G2175135 NA other upstream 1008377 31520052 ~ 31521188 (-)
G2175418 LOC106563537 other upstream 1090774 31602449 ~ 31688677 (-)
G2175420 NA other upstream 1157659 31669334 ~ 31673189 (-)

Expression



Co-expression Network