G2174503


Basic Information

Item Value
gene id G2174503
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 30781280 ~ 30783506 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2485349
ATCATATGAGGCAGCATTAAATcatttcaccttttatttgaaagtattttcatacatatcggttttaccgtttagaaatgaaaagTACTTTATGCATCTAGTCCCctcatttgaaggtgtcataagtacactgaacaaaaatataaactcaacatgcaaagtgttggtcccatgtttcatcagctgaaataaaagatcccagaaatgttccatatgcacaaaaagcttatttctctccaatgttgtgcacaaatttgtttacatccctgttagtgagtatttctcctttgtcaagataatccattcacctgacaggtgtgacatatcaagaagctgattaaacagcaggatcattaATTACataggtgcactttgtgctggggacaataaaaggaaactctaaaatgtgcagttttgtcacacaacacaatgccacagatgtctcaattttgagggagcgtgcaccagagctcttgccagataattaaatgttcatttctctaccataagtcacctccaacgttgttttagagaatttgacagtacgtccaaccggcctcacaaccgcagaccatgtgaaTGGCGTCATGAGggcaagcagtttgctgatgtcaacgttgtgaacagagtgccccatggtggcagatGGGTTAggctatgggcaggcataagatacggacaattgcattttattgatggcaatttgtgGCCTGTGTCAAGAAAGTATGTCTTGTCAAACATCAATACTTCACATGTGAGGgataaaaaaagtttttttttaaagtttttttttttgtcagaaatgccttctggaacattaATTTGTCTTAATAACCAACTTGTATGCAATctgtaaatacatatttttatatatataacgagcctagttggtttagccacagaaaaatacAGGAACTTTCCCTTTAGCCATGAttagctgagataatggatgggctggacatgccgagagatgagtttggattggtctgccatgtagcatgcttctgtctataagtatgtgtggataatcCTGTCTACCGCTgctttttttgaaagatatcatgaACCGAAAAGGTTTTGCTACTGCTCTTAGCATTGCTGCCCTGAAGTTAATAGCGCTATCAACAAAGCTCAGTGGGAAAATGTTGTGATagactactttctggaggatgatcgtgccatgctgactctctgactctgaaaatgaatcagacactgaggaaatccctgatttcagtaaaaacattttcattgaacCAGACAGTGTAGTCTTCTGATGACAAATGTGGGGAAGAAAGGGTGTAATTGTCATGGAAGAAGTTgtccgagttttgaaatcagttgaATGCCCGGTGGAATCAAAGAGATGATTGCCAAATGTGTAGGGAGTccaaaaagagaacacagaaagaaggctgttgtataaaacacctccctccagattacatcttcaaactaagcgCAACCATAGCATCTATGACAAagggagaagcgttcatccaCGTATACGGTTATatgtctagctacattttcagatattatacatttctaattttgtcagaaagtcattttcaatgcaagttaaagcatactgttagctagctagctagcgaatgtTAGCTgtctcgctagctaacattacgtgtatgatctgtgcaggagctctagaaagaggcccgagttcaagagttggaattccgagttggatgaccattcaaatgGATTTTTCCCCGTCTGAGTTTTTTTTAGTtctcagttgttttgaaagcggcAATATAATTTGGATTATGGtttattgtttagctagctagctacatgtctaaacaaaagactcgaCGATGGatgtaaccatttcactgtaccgtttacaccttctgtatcctgtgcatgtggcaaataaacagattatctttggtttaCTACACAGTGAATCCTTatagagatgggtggggctaaggcttaggagggtgtgaatgatgctgaatggttGTAGTCAAAGAAGACccctccagtaggtgtaccaaaaatATTCACAGACCATTTCCTCAaaaaagtttatcaactttcaaagcagaatc

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2485349 True 2078 lncRNA 0.39 2 30781280 30783506

Neighbor

gene id symbol gene type direction distance location
LOC110510021 LOC106563440 coding downstream 99973 30669592 ~ 30681307 (-)
klhl13 LOC106563441 coding downstream 129832 30575393 ~ 30651448 (-)
LOC110510017 LOC106563443 coding downstream 229984 30549215 ~ 30551296 (-)
LOC110510015 LOC106563445 coding downstream 245909 30527165 ~ 30535371 (-)
si:ch1073-224n8.1 LOC106563446 coding downstream 267211 30449003 ~ 30514069 (-)
LOC110510023 tmm47 coding upstream 62336 30845842 ~ 30863487 (-)
LOC110509413 LOC106563430 coding upstream 276765 31060271 ~ 31191126 (-)
LOC110509414 LOC106563553 coding upstream 420087 31203593 ~ 31204637 (-)
LOC110509415 LOC106563553 coding upstream 423958 31207464 ~ 31208521 (-)
LOC118945323 NA coding upstream 513746 31297252 ~ 31304030 (-)
G2174510 NA non-coding downstream 31625 30746755 ~ 30749655 (-)
G2174430 NA non-coding downstream 163674 30617033 ~ 30617606 (-)
G2174418 NA non-coding downstream 180067 30600820 ~ 30601213 (-)
G2174414 NA non-coding downstream 193147 30586798 ~ 30588133 (-)
G2174391 NA non-coding downstream 224468 30553683 ~ 30556812 (-)
G2174544 NA non-coding upstream 22710 30806216 ~ 30810381 (-)
G2174543 NA non-coding upstream 27106 30810612 ~ 30813020 (-)
G2174558 NA non-coding upstream 55260 30838766 ~ 30841292 (-)
G2174560 NA non-coding upstream 59423 30842929 ~ 30843161 (-)
G2174576 NA non-coding upstream 95591 30879097 ~ 30879307 (-)
G2174463 NA other downstream 108179 30672590 ~ 30673101 (-)
LOC110510010 requ other downstream 468499 30299615 ~ 30312873 (-)
G2174100 NA other downstream 803713 29975363 ~ 29977567 (-)
G2174066 NA other downstream 835862 29944465 ~ 29945418 (-)
G2173258 LOC106563498 other downstream 1353413 29424723 ~ 29427867 (-)
G2174894 NA other upstream 220249 31003755 ~ 31006435 (-)
G2175135 NA other upstream 736546 31520052 ~ 31521188 (-)
G2175418 LOC106563537 other upstream 818943 31602449 ~ 31688677 (-)
G2175420 NA other upstream 885828 31669334 ~ 31673189 (-)
G2175503 NA other upstream 938446 31721952 ~ 31726394 (-)

Expression


Co-expression Network