G2174543


Basic Information

Item Value
gene id G2174543
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 30810612 ~ 30813020 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2485389
ggcaaatgcaactttcgtatatacgggctcactgtaataccacgcagggcagaacagagaactGACAGGATGTATGTGAACAGTGTTCTTATACTGTGATGGACATAGTTCCAACACGTCTTttggcctatcacagtagagaCTGAGCGCCTCTTGGCGCTTCTTGGAGTCCTCCCTCCGTCGATGTATAGATTCTTACTGTTCTGGTATTGCAGACTAGTTATAACAGTTGCTCAGTTCctgctattgtgttgttcagtatttttccatctcagttaAACCTTGTGATGACCACCCCTCCCTAGACCTGATTAACCACAACTTTGTAGGATACAGCAAGTAACACCATGTGCTCAATATTGtcacatacaaacacaaggacaaagcatctgctgggctgttatctacagttttgcaacatgcaggtcacaccatgttactcagttcttgtcacacacacaaacaggcaagtaGATGTAGCAAGCAGTTGTTTAATCTCATGATGATGCTCAAGTGCACAAATGCAGATACCTCACACAGCCAACATCAgataatatttaatcatatatatggtaatggctataatgtaaaacaCAGAATCCCACAATCCCCCTTTTTCACACccccaaataaatatatatatgtggtCCATCTGAAACATTTTTGTGAGAATTAGAGAACCACATACACTGTGTATACAAACTTAAGAACACCTATGACAGACTGAATAGATGAACCCAGGTGTAAGCTATGatcaggttaaagaaggatttttaagccttgagacattttattttatttcaccaggtcggccagttgagaacaagttctcatttacaactgggacaaggccaagataaagcaaagcagcgcgacaaaaaaaaacacagttacacatgggataaacaaatgtacagtcaataacacaatatacaaatctatacacagtgtgtgcaaatgtagtaagatcagggaggtaaggcaataaataggccatagtggtgaaataattacaattgagcaattaaacactggagtgatagatgtgcagaagatgaatgtgtaagtagagatactgggtgcaaaggagcaaaaaaaaaatatggggatgaggtagttgggtgggctatttacagatgggctgtgtacaggtgcaatgatcagtaagctgctctgacagctaatgcttaaagctagagagggagatataagactgcagcttcagtgatttttgcaattcattccagtcattggcagcagagaactggaagaaaaggcagCCAAGAGAGGCTTCGGGGATGACCAGTAAAataaacctgctggagcgcgtgctacgggtgcgtgctgctatggtgaccagtgagctgagataaggtggaaacctaacaaagacttatagatgacctggagacagtgggtttggcgacgaatatgtagccagccaacgagagcatacaggtcgcagtgatgggtagtatatggggcgttggtgacaaaacagatggcactatgatagcaaattggatgcagtctgaatagagtgttggaggatattttgtaaatgacatggccgaagtcaaggattggtaggatagtcaattttacaagggtatgtttggcagcatgagtgaaggaggctttgttgcgaaataggaagccgattctagatttaattttgattggagatgcttaatgtgagtttacagtctaaccagacacctaggtatttgtagttgtccacatattcacaaccatccagagtagtgatgccagACGGGCGGGCGGGTAGCGATcggttaacttcttcgatatagggggcgctcttttaattccCGTTTCAAACAAGATtctgtcacgaaaagatgctcgactgtgcatataattgacagctttggaaagaaaacactctgacgttttcaaaactgcaaagatattgtctgtgagtgccacagaactgatgttacaggcgaaacccagataaaaatcaaattaggaagtgccgcattttttgaaaccgcctcattccaatgactccttttatggctgtgaaggagctaggagtcagcttacgttttccacaaggtgtctacagcattgtgacgtatttgtaggcatatcattggaagattgaccataagagactacatctaccaggcggtcgcttggtgtcctccgttgcaattattgcgtaatctccagctgcagtatttttccgtttgtttctgatgagaagccagctgccaccactgatagattattgaatagatatgtgaaaaacaccttgaggattgattctaaacaacgtttgccatgtttctgtcgaagTTATGGAGCTAACTTGGAAAAAAGTTTGCTGCATTTTCCGgtatttttcttagccaaacgtgatgaacaaaacggagcaatttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2485389 True 2409 lncRNA 0.42 1 30810612 30813020

Neighbor

gene id symbol gene type direction distance location
LOC110510021 LOC106563440 coding downstream 129305 30669592 ~ 30681307 (-)
klhl13 LOC106563441 coding downstream 159164 30575393 ~ 30651448 (-)
LOC110510017 LOC106563443 coding downstream 259316 30549215 ~ 30551296 (-)
LOC110510015 LOC106563445 coding downstream 275241 30527165 ~ 30535371 (-)
si:ch1073-224n8.1 LOC106563446 coding downstream 296543 30449003 ~ 30514069 (-)
LOC110510023 tmm47 coding upstream 32822 30845842 ~ 30863487 (-)
LOC110509413 LOC106563430 coding upstream 247251 31060271 ~ 31191126 (-)
LOC110509414 LOC106563553 coding upstream 390573 31203593 ~ 31204637 (-)
LOC110509415 LOC106563553 coding upstream 394444 31207464 ~ 31208521 (-)
LOC118945323 NA coding upstream 484232 31297252 ~ 31304030 (-)
G2174544 NA non-coding downstream 231 30806216 ~ 30810381 (-)
G2174512 NA non-coding downstream 18209 30749790 ~ 30792403 (-)
G2174503 NA non-coding downstream 27106 30781280 ~ 30783506 (-)
G2174510 NA non-coding downstream 60957 30746755 ~ 30749655 (-)
G2174430 NA non-coding downstream 193006 30617033 ~ 30617606 (-)
G2174558 NA non-coding upstream 25746 30838766 ~ 30841292 (-)
G2174560 NA non-coding upstream 29909 30842929 ~ 30843161 (-)
G2174576 NA non-coding upstream 66077 30879097 ~ 30879307 (-)
G2174582 NA non-coding upstream 100015 30913035 ~ 30913743 (-)
G2174860 NA non-coding upstream 145096 30958116 ~ 30959974 (-)
G2174463 NA other downstream 137511 30672590 ~ 30673101 (-)
LOC110510010 requ other downstream 497831 30299615 ~ 30312873 (-)
G2174100 NA other downstream 833045 29975363 ~ 29977567 (-)
G2174066 NA other downstream 865194 29944465 ~ 29945418 (-)
G2173258 LOC106563498 other downstream 1382745 29424723 ~ 29427867 (-)
G2174894 NA other upstream 190735 31003755 ~ 31006435 (-)
G2175135 NA other upstream 707032 31520052 ~ 31521188 (-)
G2175418 LOC106563537 other upstream 789429 31602449 ~ 31688677 (-)
G2175420 NA other upstream 856314 31669334 ~ 31673189 (-)
G2175503 NA other upstream 908932 31721952 ~ 31726394 (-)

Expression


Co-expression Network