G2175021


Basic Information

Item Value
gene id G2175021
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31261189 ~ 31265370 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2485933
TACCATTACAGAGACTTGCTTTTCCAGGCACTAATTTTGCTTCTCTTCTATAAATTGACTGCCATCTGCCGCAGAATGTTTGGCAAAAGAGGGCCTTCCTTCCCCTGCCAGCTCCGAGCTTTTTCTCGCTCTGAGAGACATGTGTGATCCTGGAACAAGGTTGACAGATATCCATGGATACCGACTGTGCTCTATTATAGTGGATTCATCGATCACTGTTCATGGCACATCTTAAGAAACTCCTGTTAGCCAGCATAATTATATTCATACAGGGGCGGATGTTTTAGCCTTAGTTTTATTCTGTAAATAACATCTGTTGTAGTATGGAGGAATAAATAGCATGAGTGATAGTGTGCAAAGAGGACCGGGGAAACagtgagtgagtaaagagaacagaggatacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagaggacagtggatacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagaggacagaggaaacaatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagtgaaacataatgagtgagtaaagagaacagaggatacataatgagtgagtaaagaggacagtgaaacatgagtgagtaaagaggacagtgaaacataatgagtgaataaagagaacagtggaaacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagaggacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagtgaaacataatgagtgagtaaagagaacagaggatacataatgagtgagtaaagaggacagtgaaacatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagtggaaacataatgagtgagtaaagacaaaagaggaaacataatgagtgagtaaagaggacagaggaaacacaatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagaggacagtgaaacatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagtgggaacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagacaacagtggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagaggacagaggaaacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagaggacagtgaaacatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaaaagaacagtgaaacataatgagtgagtaaagagaacagaggatacataatgagtgagtaaagaggacagtgaaacatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagtggaaacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagaggacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggatacataatgagtgagtaaataGGACAGTGAaacatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagtggaaacataatgagtgagtaaagacaaaagaggaaacataatgagtgagtaaagaggacagaggaaacacaatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagaggacagtgaaacatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagtggaaacataatgagtgagtaaagacaacagaggaaacataatgagtgagtaaagaggacagtgaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagacaacagtggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagacaacggaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagagaacagaggaaacataatgagtgagtaaagaggacagtgaaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2485933 True 2685 lncRNA 0.37 2 31261189 31265370

Neighbor

gene id symbol gene type direction distance location
LOC110509415 LOC106563553 coding downstream 52668 31207464 ~ 31208521 (-)
LOC110509414 LOC106563553 coding downstream 56552 31203593 ~ 31204637 (-)
LOC110509413 LOC106563430 coding downstream 70063 31060271 ~ 31191126 (-)
LOC110510023 tmm47 coding downstream 397702 30845842 ~ 30863487 (-)
LOC110510021 LOC106563440 coding downstream 579882 30669592 ~ 30681307 (-)
LOC118945323 NA coding upstream 31882 31297252 ~ 31304030 (-)
LOC118945266 NA coding upstream 293463 31558833 ~ 31560156 (-)
tnfsf13 tnfsf13 coding upstream 338724 31604094 ~ 31607229 (-)
LOC118945265 inca1 coding upstream 342890 31608260 ~ 31610410 (-)
LOC110510028 psmb6 coding upstream 345173 31610543 ~ 31613567 (-)
G2175011 NA non-coding downstream 28647 31232339 ~ 31232542 (-)
G2174989 NA non-coding downstream 55874 31201618 ~ 31205315 (-)
G2174981 NA non-coding downstream 77779 31183131 ~ 31183410 (-)
G2174973 NA non-coding downstream 89390 31171497 ~ 31171799 (-)
G2174969 NA non-coding downstream 97782 31163184 ~ 31163407 (-)
G2175050 NA non-coding upstream 74184 31339554 ~ 31372998 (-)
G2175049 NA non-coding upstream 75805 31341175 ~ 31374662 (-)
G2175071 NA non-coding upstream 133048 31398418 ~ 31403881 (-)
G2175083 NA non-coding upstream 151219 31416589 ~ 31421766 (-)
G2175084 NA non-coding upstream 159524 31424894 ~ 31445815 (-)
G2174894 NA other downstream 254754 31003755 ~ 31006435 (-)
G2174463 NA other downstream 588088 30672590 ~ 30673101 (-)
LOC110510010 requ other downstream 948408 30299615 ~ 30312873 (-)
G2174100 NA other downstream 1283622 29975363 ~ 29977567 (-)
G2174066 NA other downstream 1315771 29944465 ~ 29945418 (-)
G2175135 NA other upstream 254682 31520052 ~ 31521188 (-)
G2175418 LOC106563537 other upstream 337079 31602449 ~ 31688677 (-)
G2175420 NA other upstream 403964 31669334 ~ 31673189 (-)
G2175503 NA other upstream 456582 31721952 ~ 31726394 (-)
LOC110510037 LOC106563414 other upstream 461167 31726537 ~ 31731451 (-)

Expression


Co-expression Network