Gene
RNA
| Item | Value |
|---|---|
| gene id | G2175050 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 31339554 ~ 31372998 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2485967 | False | 268 | lncRNA | 0.50 | 2 | 31339554 | 31370979 |
| TU2485968 | True | 268 | lncRNA | 0.50 | 2 | 31339554 | 31372998 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945323 | NA | coding | downstream | 35524 | 31297252 ~ 31304030 (-) |
| LOC110509415 | LOC106563553 | coding | downstream | 131033 | 31207464 ~ 31208521 (-) |
| LOC110509414 | LOC106563553 | coding | downstream | 134917 | 31203593 ~ 31204637 (-) |
| LOC110509413 | LOC106563430 | coding | downstream | 148428 | 31060271 ~ 31191126 (-) |
| LOC110510023 | tmm47 | coding | downstream | 476067 | 30845842 ~ 30863487 (-) |
| LOC118945266 | NA | coding | upstream | 185835 | 31558833 ~ 31560156 (-) |
| tnfsf13 | tnfsf13 | coding | upstream | 231096 | 31604094 ~ 31607229 (-) |
| LOC118945265 | inca1 | coding | upstream | 235262 | 31608260 ~ 31610410 (-) |
| LOC110510028 | psmb6 | coding | upstream | 237545 | 31610543 ~ 31613567 (-) |
| xrra1 | xrra1 | coding | upstream | 300349 | 31673347 ~ 31688712 (-) |
| G2175021 | NA | non-coding | downstream | 74184 | 31261189 ~ 31265370 (-) |
| G2175011 | NA | non-coding | downstream | 107012 | 31232339 ~ 31232542 (-) |
| G2174989 | NA | non-coding | downstream | 134239 | 31201618 ~ 31205315 (-) |
| G2174981 | NA | non-coding | downstream | 156144 | 31183131 ~ 31183410 (-) |
| G2174973 | NA | non-coding | downstream | 167755 | 31171497 ~ 31171799 (-) |
| G2175071 | NA | non-coding | upstream | 25420 | 31398418 ~ 31403881 (-) |
| G2175083 | NA | non-coding | upstream | 43591 | 31416589 ~ 31421766 (-) |
| G2175084 | NA | non-coding | upstream | 51896 | 31424894 ~ 31445815 (-) |
| G2175139 | NA | non-coding | upstream | 150527 | 31523525 ~ 31523741 (-) |
| G2175140 | NA | non-coding | upstream | 155567 | 31528565 ~ 31528767 (-) |
| G2174894 | NA | other | downstream | 333119 | 31003755 ~ 31006435 (-) |
| G2174463 | NA | other | downstream | 666453 | 30672590 ~ 30673101 (-) |
| LOC110510010 | requ | other | downstream | 1026773 | 30299615 ~ 30312873 (-) |
| G2174100 | NA | other | downstream | 1361987 | 29975363 ~ 29977567 (-) |
| G2174066 | NA | other | downstream | 1394136 | 29944465 ~ 29945418 (-) |
| G2175135 | NA | other | upstream | 147054 | 31520052 ~ 31521188 (-) |
| G2175418 | LOC106563537 | other | upstream | 229451 | 31602449 ~ 31688677 (-) |
| G2175420 | NA | other | upstream | 296336 | 31669334 ~ 31673189 (-) |
| G2175503 | NA | other | upstream | 348954 | 31721952 ~ 31726394 (-) |
| LOC110510037 | LOC106563414 | other | upstream | 353539 | 31726537 ~ 31731451 (-) |
