G2175135


Basic Information

Item Value
gene id G2175135
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31520052 ~ 31521188 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486088
catgatgacaaagtgaaaacagttttaccttatttacataagtattcagaccctttgctatgagacttgaaattgagctcaggtgcatcctgtttccatagatcatccttgaaatgtttctacaacttgattggtgtccatctgtggtaaattcaattgattggacctgatttggaaaggaacacacctgtctatatatgttcccacagttgacactgcatgccagagcaaaaaccaaaccatgaggtcgaaggaattttctGTAGGAAAAATAAAAtgatctgcagcattgaaggtcccaaagaacacagtggcctccatcattctcaaatggaagaagtttggagccaccaagactcCTAGAACTGGCTTCCTGGTCAaacctgagcaatcgggggacaagggccttggtcggggatGTGACCAGGAACCCGATGGTTCCACAGagttctgtggagatgggagaaccttccagacagacaaccatctctgcagcactccaccagtcaggccttaatggtagagtggtcagacggaagccacatctcagtaaaaggcacatgacagcccactaggAGTTggccaaaggcacctaaatgactctcagaccatgagaatcaagattctctggtctgatgaaaccaagattgaactctttggtctgaatgccaattgtcacatctggaggaaacctgtttccatccctacggtgaaccatggtggtggcaacatgctgttggaatgtttttcagcggcagggactgggagactagtcaggatcgagggaaagatgaacagagcaaagtacagagagatccttgatgaaaacctactccagagcgctcaggacctcagactggggcaaaggttcaccttccaacaggacaacgaccctaagcacacagccaagacaacgtaggagtggctttgtgtcaagtctctgaatgtccttgagtggcccagattGAACatcttgaacctgattgaacatctctggagagacatgaacatagctgtgcagcaacgctccccatccaacctgacagagcttgagaggatctgcagagaagaataggataaactccccaaatacaggtgtaccaagcttgtagcgtcatacccaagaagactcaaggc

Function

NR:

description
TC1-like transposase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486088 True 1137 TUCP 0.47 1 31520052 31521188

Neighbor

gene id symbol gene type direction distance location
LOC118945323 NA coding downstream 216022 31297252 ~ 31304030 (-)
LOC110509415 LOC106563553 coding downstream 311531 31207464 ~ 31208521 (-)
LOC110509414 LOC106563553 coding downstream 315415 31203593 ~ 31204637 (-)
LOC110509413 LOC106563430 coding downstream 328926 31060271 ~ 31191126 (-)
LOC110510023 tmm47 coding downstream 656565 30845842 ~ 30863487 (-)
LOC118945266 NA coding upstream 37645 31558833 ~ 31560156 (-)
tnfsf13 tnfsf13 coding upstream 82906 31604094 ~ 31607229 (-)
LOC118945265 inca1 coding upstream 87072 31608260 ~ 31610410 (-)
LOC110510028 psmb6 coding upstream 89355 31610543 ~ 31613567 (-)
xrra1 xrra1 coding upstream 152159 31673347 ~ 31688712 (-)
G2175084 NA non-coding downstream 74237 31424894 ~ 31445815 (-)
G2175083 NA non-coding downstream 98286 31416589 ~ 31421766 (-)
G2175071 NA non-coding downstream 116171 31398418 ~ 31403881 (-)
G2175049 NA non-coding downstream 145390 31341175 ~ 31374662 (-)
G2175050 NA non-coding downstream 147054 31339554 ~ 31372998 (-)
G2175139 NA non-coding upstream 2337 31523525 ~ 31523741 (-)
G2175140 NA non-coding upstream 7377 31528565 ~ 31528767 (-)
G2175150 NA non-coding upstream 16219 31537407 ~ 31537629 (-)
G2175156 NA non-coding upstream 20241 31541429 ~ 31541659 (-)
G2175170 NA non-coding upstream 22922 31544110 ~ 31544322 (-)
G2174894 NA other downstream 513617 31003755 ~ 31006435 (-)
G2174463 NA other downstream 846951 30672590 ~ 30673101 (-)
LOC110510010 requ other downstream 1207271 30299615 ~ 30312873 (-)
G2174100 NA other downstream 1542485 29975363 ~ 29977567 (-)
G2174066 NA other downstream 1574634 29944465 ~ 29945418 (-)
G2175418 LOC106563537 other upstream 81261 31602449 ~ 31688677 (-)
G2175420 NA other upstream 148146 31669334 ~ 31673189 (-)
G2175503 NA other upstream 200764 31721952 ~ 31726394 (-)
LOC110510037 LOC106563414 other upstream 205349 31726537 ~ 31731451 (-)
LOC110509376 LOC107567170 other upstream 215725 31736713 ~ 31738259 (-)

Expression


Co-expression Network