G2175149


Basic Information

Item Value
gene id G2175149
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31537301 ~ 31537807 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486102
atgctgaactgtagtcaatgaacagcattctcacataggtattcctcttgtcctaGATGGgttaggacagtgtgcagtgtggttgcgattgcgtcgtctgtggacctattggggcggtaagcaaattggagtgggtctagggtgtcaggtagggtggaggtgatatggtccttgactagtctctcaaaacacttcatgatgacggaagtgagtgctacggggcagtagtcgtttagctcagttaccttagctttcttgggaacaggaacaatggtggcccctcttgaagcatttgggaacagcagattgggataaggattgattgaatatgtccgtaaacacaccagccagctggtctgcgcatgctctgaggacgcggctggggatgccgtctgggcctgcagccttgcgagggttaacacgtttaaatattttactcacctcggctgcagtgaaggagagtccgcaggttttggtagcgggccatgtcagtggcactgtattgtc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486102 True 507 lncRNA 0.51 1 31537301 31537807

Neighbor

gene id symbol gene type direction distance location
ephb4a LOC106603099 coding upstream 50185 31437057 ~ 31487116 (+)
LOC110509418 LOC106563427 coding upstream 93561 31237429 ~ 31443740 (+)
mepce LOC106563428 coding upstream 305770 31226337 ~ 31231531 (+)
her1 LOC106603184 coding upstream 318324 31217958 ~ 31218977 (+)
LOC110510025 LOC106563429 coding upstream 479492 31022733 ~ 31057809 (+)
LOC110510029 LOC106563422 coding downstream 84898 31622705 ~ 31640277 (+)
spag7 spag7 coding downstream 108766 31646573 ~ 31652210 (+)
chrdl2 LOC106563420 coding downstream 115670 31653477 ~ 31659720 (+)
neu3.1 neu3 coding downstream 141264 31679071 ~ 31682119 (+)
st14b LOC106563416 coding downstream 152339 31690146 ~ 31701571 (+)
G2175147 NA non-coding upstream 746 31536324 ~ 31536555 (+)
G2175128 NA non-coding upstream 24898 31512074 ~ 31512403 (+)
G2175127 NA non-coding upstream 25257 31511625 ~ 31512044 (+)
G2175120 NA non-coding upstream 46146 31490914 ~ 31491155 (+)
G2175119 NA non-coding upstream 47227 31489707 ~ 31490074 (+)
G2175165 NA non-coding downstream 18212 31556019 ~ 31556333 (+)
G2175166 NA non-coding downstream 18829 31556636 ~ 31556886 (+)
G2175183 NA non-coding downstream 29148 31566955 ~ 31567332 (+)
G2175213 NA non-coding downstream 46989 31584796 ~ 31592173 (+)
G2175240 NA non-coding downstream 103797 31641604 ~ 31644962 (+)
G2174785 NA other upstream 218924 31317837 ~ 31318377 (+)
LOC110510022 LOC106563433 other upstream 713157 30817845 ~ 30824144 (+)
G2173841 LOC106563447 other upstream 1069177 30463942 ~ 30468124 (+)
G2173761 LOC106563448 other upstream 1196610 30336852 ~ 30355090 (+)
G2173754 LOC106563449 other upstream 1213686 30319648 ~ 30323615 (+)
G2175233 psmb6 other downstream 72737 31610544 ~ 31611469 (+)
LOC110509422 LOC106563560 other downstream 363174 31820484 ~ 31908546 (+)
G2175413 NA other downstream 499240 32037047 ~ 32037736 (+)
LOC110509425 LOC106563572 other downstream 583963 32115629 ~ 32150579 (+)
cxxc5a LOC106563628 other downstream 1685010 33212994 ~ 33235535 (+)

Expression


Co-expression Network