G2175169


Basic Information

Item Value
gene id G2175169
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31557670 ~ 31558772 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486123
TCATAACACCCACACTGTGATGAAAGTTCCTAgatatttgtattttgtattgatttatctcacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacatctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtatgctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaactgcgacctggccaagataaagcaaagcagttcgacaggtacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtagaaaaa
>TU2486124
TCATAACACCCACACTGTGATGAAAGTTCCTAgatatttgtattttgtattgatttatctcacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacatctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtatgctagttgagaacacctttatttaaccaggtaggctggttgagaacacctttatttaaccaggtgggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctggttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctatttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggctagttgagaacacctttatttaaccaggtaggcaagttgagaacaagttctcatttacaactgcgacctggccaagataaagcaaagcagttcgacaggtacaacgacacagagttacacatggagtaaaacaaacatacagtcaataatacagtagaaaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC106587709, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486123 False 509 lncRNA 0.38 2 31557670 31558772
TU2486124 True 740 lncRNA 0.39 2 31557670 31558772

Neighbor

gene id symbol gene type direction distance location
LOC118945323 NA coding downstream 253640 31297252 ~ 31304030 (-)
LOC110509415 LOC106563553 coding downstream 349149 31207464 ~ 31208521 (-)
LOC110509414 LOC106563553 coding downstream 353033 31203593 ~ 31204637 (-)
LOC110509413 LOC106563430 coding downstream 366544 31060271 ~ 31191126 (-)
LOC110510023 tmm47 coding downstream 694183 30845842 ~ 30863487 (-)
LOC118945266 NA coding upstream 61 31558833 ~ 31560156 (-)
tnfsf13 tnfsf13 coding upstream 45322 31604094 ~ 31607229 (-)
LOC118945265 inca1 coding upstream 49488 31608260 ~ 31610410 (-)
LOC110510028 psmb6 coding upstream 51771 31610543 ~ 31613567 (-)
xrra1 xrra1 coding upstream 114575 31673347 ~ 31688712 (-)
G2175170 NA non-coding downstream 13348 31544110 ~ 31544322 (-)
G2175156 NA non-coding downstream 16011 31541429 ~ 31541659 (-)
G2175150 NA non-coding downstream 20041 31537407 ~ 31537629 (-)
G2175140 NA non-coding downstream 28903 31528565 ~ 31528767 (-)
G2175139 NA non-coding downstream 33929 31523525 ~ 31523741 (-)
G2175181 NA non-coding upstream 4612 31563384 ~ 31563683 (-)
G2175193 NA non-coding upstream 12281 31571053 ~ 31571277 (-)
G2175209 NA non-coding upstream 23111 31581883 ~ 31582113 (-)
G2175215 NA non-coding upstream 27676 31586448 ~ 31587882 (-)
G2175216 NA non-coding upstream 27859 31586631 ~ 31589161 (-)
G2175135 NA other downstream 36482 31520052 ~ 31521188 (-)
G2174894 NA other downstream 551235 31003755 ~ 31006435 (-)
G2174463 NA other downstream 884569 30672590 ~ 30673101 (-)
LOC110510010 requ other downstream 1244889 30299615 ~ 30312873 (-)
G2174100 NA other downstream 1580103 29975363 ~ 29977567 (-)
G2175418 LOC106563537 other upstream 43677 31602449 ~ 31688677 (-)
G2175420 NA other upstream 110562 31669334 ~ 31673189 (-)
G2175503 NA other upstream 163180 31721952 ~ 31726394 (-)
LOC110510037 LOC106563414 other upstream 167765 31726537 ~ 31731451 (-)
LOC110509376 LOC107567170 other upstream 178141 31736713 ~ 31738259 (-)

Expression


Co-expression Network