Gene
RNA
| Item | Value |
|---|---|
| gene id | G2175512 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 31762030 ~ 31762658 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2486565 | True | 523 | lncRNA | 0.35 | 2 | 31762030 | 31762658 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkeyp-117b8.4 | LOC106563408 | coding | downstream | 763 | 31757328 ~ 31761267 (-) |
| ehd2a | LOC106563411 | coding | downstream | 6231 | 31747750 ~ 31755799 (-) |
| selenow1 | selenow | coding | downstream | 11599 | 31747750 ~ 31750431 (-) |
| LOC110510038 | sycn | coding | downstream | 21468 | 31739902 ~ 31740562 (-) |
| LOC110509376 | LOC107567170 | coding | downstream | 23771 | 31736713 ~ 31738259 (-) |
| rsph4a | LOC106563409 | coding | upstream | 9241 | 31771899 ~ 31778015 (-) |
| sympk | sympk | coding | upstream | 15487 | 31778145 ~ 31789447 (-) |
| LOC110509423 | LOC106563561 | coding | upstream | 147412 | 31910070 ~ 31914335 (-) |
| LOC118945354 | LOC106563561 | coding | upstream | 151967 | 31914625 ~ 31920308 (-) |
| LOC118945355 | LOC106563561 | coding | upstream | 157762 | 31920420 ~ 31929067 (-) |
| G2175476 | selenow | non-coding | downstream | 11615 | 31747773 ~ 31750415 (-) |
| G2175491 | NA | non-coding | downstream | 50985 | 31710809 ~ 31711045 (-) |
| G2175489 | NA | non-coding | downstream | 54657 | 31707041 ~ 31707373 (-) |
| G2175418 | LOC106563537 | non-coding | downstream | 73353 | 31602449 ~ 31688677 (-) |
| G2175459 | NA | non-coding | downstream | 102341 | 31657109 ~ 31659689 (-) |
| G2175520 | NA | non-coding | upstream | 43635 | 31806293 ~ 31806703 (-) |
| G2175519 | NA | non-coding | upstream | 44806 | 31807464 ~ 31807891 (-) |
| G2175521 | NA | non-coding | upstream | 46372 | 31809030 ~ 31809693 (-) |
| G2175522 | NA | non-coding | upstream | 48439 | 31811097 ~ 31811336 (-) |
| G2175524 | NA | non-coding | upstream | 50904 | 31813562 ~ 31813776 (-) |
| LOC110510037 | LOC106563414 | other | downstream | 32736 | 31726537 ~ 31731451 (-) |
| G2175503 | NA | other | downstream | 35636 | 31721952 ~ 31726394 (-) |
| G2175969 | LOC100194703 | other | upstream | 500625 | 32263283 ~ 32266089 (-) |
| LOC110510065 | LOC106603070 | other | upstream | 522092 | 32282188 ~ 32287263 (-) |
| cpi1 | cpi1 | other | upstream | 668852 | 32395346 ~ 32433641 (-) |
| G2176363 | NA | other | upstream | 880744 | 32643402 ~ 32644572 (-) |
| G2177695 | NA | other | upstream | 1748638 | 33511296 ~ 33512326 (-) |
