G2175545


Basic Information

Item Value
gene id G2175545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 31837072 ~ 31837680 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2486601
AACAGTTAAAATCAACAAACAATTGTGTGAGTCATAGAATGATTGTGCAAGTTACGGACTTTAATCTCCTGGAAAGATTGATACTGTATAAAGAAAGCTCCAAGAACAATATTGTTTGTTTTTCTAAACATCTTGAATAGTTATGTAAGGGAAATGTTAATGTTGGTGCTATTCTTATAACtcatttctgtgttctattcatgtgctgttctataaACCAATTCCTGTGTTGATGCAAGTGGCTGACTGCACAAATCACACCTATCAGTAGCTGtgatttggcagtacgcccagaccgTGTTTTGAGAACGAAGGACCGTGTTTTGAGAACAAACtaaagatatctcagtttcaaggtctcagcttagagaagagaagccttgtgaggtgttggtctgtcacatgttatgaaacaGTATTGGTCAAGCACATGGATGAAACAAAACAgtaatgattaattaattatgctaaatcatggaaatataacatgtctgtgtataGCCGTGTGTAAGACAACTGTTGGGACTGCTTCGGCAGAGTTTTTCTGACAGacgtgtactatggtgcattgagttggttggaacctctccagcgcgttgacaataaaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2486601 True 609 lncRNA 0.38 1 31837072 31837680

Neighbor

gene id symbol gene type direction distance location
sympk sympk coding downstream 47625 31778145 ~ 31789447 (-)
rsph4a LOC106563409 coding downstream 59057 31771899 ~ 31778015 (-)
si:dkeyp-117b8.4 LOC106563408 coding downstream 75805 31757328 ~ 31761267 (-)
ehd2a LOC106563411 coding downstream 81273 31747750 ~ 31755799 (-)
selenow1 selenow coding downstream 86641 31747750 ~ 31750431 (-)
LOC110509423 LOC106563561 coding upstream 72390 31910070 ~ 31914335 (-)
LOC118945354 LOC106563561 coding upstream 76945 31914625 ~ 31920308 (-)
LOC118945355 LOC106563561 coding upstream 82740 31920420 ~ 31929067 (-)
LOC100135879 cbr1 coding upstream 105062 31942742 ~ 31947694 (-)
LOC100136606 cbr1 coding upstream 118481 31956161 ~ 31958564 (-)
G2175537 NA non-coding downstream 8660 31827860 ~ 31828412 (-)
G2175534 NA non-coding downstream 11232 31825623 ~ 31825840 (-)
G2175524 NA non-coding downstream 23296 31813562 ~ 31813776 (-)
G2175522 NA non-coding downstream 25736 31811097 ~ 31811336 (-)
G2175521 NA non-coding downstream 27379 31809030 ~ 31809693 (-)
G2175585 NA non-coding upstream 36398 31874078 ~ 31874416 (-)
G2175592 NA non-coding upstream 44698 31882378 ~ 31882655 (-)
G2175595 NA non-coding upstream 52459 31890139 ~ 31890370 (-)
G2175597 NA non-coding upstream 53679 31891359 ~ 31891592 (-)
G2175599 NA non-coding upstream 54982 31892662 ~ 31892965 (-)
LOC110509376 LOC107567170 other downstream 98837 31736713 ~ 31738259 (-)
LOC110510037 LOC106563414 other downstream 107778 31726537 ~ 31731451 (-)
G2175503 NA other downstream 110678 31721952 ~ 31726394 (-)
G2175418 LOC106563537 other downstream 150070 31602449 ~ 31688677 (-)
G2175969 LOC100194703 other upstream 425603 32263283 ~ 32266089 (-)
LOC110510065 LOC106603070 other upstream 447070 32282188 ~ 32287263 (-)
cpi1 cpi1 other upstream 593830 32395346 ~ 32433641 (-)
G2176363 NA other upstream 805722 32643402 ~ 32644572 (-)
G2177695 NA other upstream 1673616 33511296 ~ 33512326 (-)

Expression


Co-expression Network