Gene
RNA
| Item | Value |
|---|---|
| gene id | G2175600 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 31894252 ~ 31894471 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| LOW QUALITY PROTEIN: ryanodine receptor 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2486656 | True | 220 | lncRNA | 0.45 | 1 | 31894252 | 31894471 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| sympk | sympk | coding | downstream | 104805 | 31778145 ~ 31789447 (-) |
| rsph4a | LOC106563409 | coding | downstream | 116237 | 31771899 ~ 31778015 (-) |
| si:dkeyp-117b8.4 | LOC106563408 | coding | downstream | 132985 | 31757328 ~ 31761267 (-) |
| ehd2a | LOC106563411 | coding | downstream | 138453 | 31747750 ~ 31755799 (-) |
| selenow1 | selenow | coding | downstream | 143821 | 31747750 ~ 31750431 (-) |
| LOC110509423 | LOC106563561 | coding | upstream | 15599 | 31910070 ~ 31914335 (-) |
| LOC118945354 | LOC106563561 | coding | upstream | 20154 | 31914625 ~ 31920308 (-) |
| LOC118945355 | LOC106563561 | coding | upstream | 25949 | 31920420 ~ 31929067 (-) |
| LOC100135879 | cbr1 | coding | upstream | 48271 | 31942742 ~ 31947694 (-) |
| LOC100136606 | cbr1 | coding | upstream | 61690 | 31956161 ~ 31958564 (-) |
| G2175599 | NA | non-coding | downstream | 1287 | 31892662 ~ 31892965 (-) |
| G2175597 | NA | non-coding | downstream | 2660 | 31891359 ~ 31891592 (-) |
| G2175595 | NA | non-coding | downstream | 3882 | 31890139 ~ 31890370 (-) |
| G2175592 | NA | non-coding | downstream | 11597 | 31882378 ~ 31882655 (-) |
| G2175585 | NA | non-coding | downstream | 19836 | 31874078 ~ 31874416 (-) |
| G2175607 | LOC106563560 | non-coding | upstream | 7993 | 31902464 ~ 31902740 (-) |
| G2175615 | NA | non-coding | upstream | 13625 | 31908096 ~ 31908380 (-) |
| G2175629 | NA | non-coding | upstream | 75987 | 31970458 ~ 31970660 (-) |
| G2175630 | NA | non-coding | upstream | 76425 | 31970896 ~ 31971182 (-) |
| G2175645 | spsy | non-coding | upstream | 94545 | 31989016 ~ 31990645 (-) |
| LOC110509376 | LOC107567170 | other | downstream | 156017 | 31736713 ~ 31738259 (-) |
| LOC110510037 | LOC106563414 | other | downstream | 164958 | 31726537 ~ 31731451 (-) |
| G2175503 | NA | other | downstream | 167858 | 31721952 ~ 31726394 (-) |
| G2175418 | LOC106563537 | other | downstream | 207250 | 31602449 ~ 31688677 (-) |
| G2175969 | LOC100194703 | other | upstream | 368812 | 32263283 ~ 32266089 (-) |
| LOC110510065 | LOC106603070 | other | upstream | 390279 | 32282188 ~ 32287263 (-) |
| cpi1 | cpi1 | other | upstream | 537039 | 32395346 ~ 32433641 (-) |
| G2176363 | NA | other | upstream | 748931 | 32643402 ~ 32644572 (-) |
| G2177695 | NA | other | upstream | 1616825 | 33511296 ~ 33512326 (-) |
