G2175921


Basic Information

Item Value
gene id G2175921
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 32151411 ~ 32153545 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2487065
CTCTATCTATCTACGAGGCAAGCAGGACATGAGAGAGGCTGGGTGGGACAGAATTAGGTGTAAGTAACAGTTGTTTCAAAGGATCGAGTGGAGTTGTTCAGGATAATATGAAGTGGAGTATGTGATAGATAGGAACATGGAATGTCTACACTTGCAGGATGTTTGGTAGTGAGATGGTGTAAGGCAGAAAGGAGTAGCCTGTAGAGTGTTAGCTAGGTCGAGCAGGGAGGTCAGAGATCAGCAACAGAGACAATAGAGGCATTCATGACAGATAATTATGGATTTTCATTGGAAATTATGATGGGGCAAAGAAAAATCTGGGATTATAATGAGCACAGATCAATTTGAGTCTCTGTAGTTTGAGTCTCTTTAATTTGAGTCTCTGtagtagtgtttctctctctcttcagtcactGTATGTATACATGACACTGGGACAGATGAAAGCCATTACCAAAGGTGAGAGAGGGTTTACAATGCCAGTGATAAACTCATTATGCATGTATTATAAGGCCTCCTGAAATTGGAGATGACATTTTCCATGAGAATTACACAGGAAGCAGATGGATCTATTCCATGTTGTACTTATACAATACGGTGCATAGGTCTCTATCCGAGCACATACATGTAAACAATGCACTGAACGATAACCTTTGTTGCCTGCTATTTACCATAGTTTTACTGTCATGTTGCTTAAATGTTGAATACTAAGATGATCAACTGTGTATTTTAGTATGGTATAAGACATGCTGATTCTGTCAGGCTGTACAGGAACATAAAGCTGACTCTTTACATTCTCAACCAGCTAGTCAATGTAGTCAACCAACTAAACCACCCTCCTGCCCCAGATGTTACACAATTTACCATCCCCACAATGCACTTGGGCAATTCAAAGAACAGTCTGTGTATGTGTGCTCGCCTGCGTCTGCCCCGAGAGAAAGGATGTACTCCTTTTGAAGCTAATTTAGCATGCTCAATTTCCAGTATCTCCATGCCAACCCCACTAGGTCAACCAATGAAAGGGTTGTGAGAGTAGGGAGGAGTGGTctagatgtacagtaccagtcaaaagtttgggcacacgtactcattccagggtttctctttatttttactattttctacattgtagaataatagtgaaaacatcaacactatgaaataacacatatggactcatgtgtaaccaaaaaaaagtgtctaTATTTTGAGATAAGAGCTTAATTTTTGAGATAagagcttcacctggaatgcttttccaacagtcttgaaggagttcccacatatgctgagcgctcgttggctgcttttccttcactctgcggtccaactcattccaaaccatctcaattgggttcaggtcatctgatgcagcactccatcactctccttggtcaattagcccttacacagcctggaggtgtgttgggtcattgtcctgttgagaaacaaataatagtcccactaagagcaaaccagatgggaaggcgtatcgctgcaggatgctgtggtagccatgctggttaagcgtgccttgaattctaaataaaataaaatatattttgatttgattaacacttttttggttattatatgtgtgttatttcatagttttgatgtcttcattattattattattcaatgtagaaaatagtcaaagtaaagaaaaacccttgaatgagtaggtgtgtccaaacttttgacaggtactgtatgtataaggGCCCCAACATGTGAACACAGAAATAGGATGATGTCTGTAATAATATGTATCATACCATGCTTGGATGTATAATTCTAAATATTTCCTCATTCACTCATGATTTGCATAATGCTGTCATAAGTGTACCTGCAAATTTGAAATAATCAATTTGAATGTGGTTATTATGTTGTTATGAAATGTAAAACATGGATATTGCCTCTTAATCCAGTTTGTGCTGTGAAGAAACACAGTTAGTctccaccaaaacacacacaagtGTGAAAAAAGCAACCAATTCTCTAATGTATCATCTGTATGTGGATAAGCAGAAATAATTAGTGTGCACCAGATGGATACTCTGAGCCATGTAGGAGTTTGCAAATTAGGTCACTAGTTCACAAGTGAAGACAGTTAGCTAGTGTGAAGGCAGCAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2487065 True 2135 lncRNA 0.39 1 32151411 32153545

Neighbor

gene id symbol gene type direction distance location
LOC110509424 NA coding downstream 44853 32103208 ~ 32106558 (-)
LOC110510054 LOC106563567 coding downstream 113584 32021450 ~ 32037827 (-)
LOC100136606 cbr1 coding downstream 192847 31956161 ~ 31958564 (-)
LOC100135879 cbr1 coding downstream 203717 31942742 ~ 31947694 (-)
LOC118945355 LOC106563561 coding downstream 222344 31920420 ~ 31929067 (-)
LOC110510059 LOC106563634 coding upstream 49446 32202991 ~ 32219471 (-)
LOC110510060 LOC106563578 coding upstream 77308 32230853 ~ 32237582 (-)
poglut3 kdelc2 coding upstream 92678 32246223 ~ 32252711 (-)
LOC110510065 LOC106603070 coding upstream 128856 32282188 ~ 32287263 (-)
si:ch211-114c12.2 LOC106563582 coding upstream 133877 32287422 ~ 32296426 (-)
G2175902 NA non-coding downstream 30468 32120506 ~ 32120943 (-)
G2175893 yo84 non-coding downstream 39503 32111686 ~ 32111908 (-)
G2175890 NA non-coding downstream 41534 32109641 ~ 32109877 (-)
G2175664 NA non-coding downstream 116698 32034382 ~ 32034713 (-)
G2175663 NA non-coding downstream 117097 32034009 ~ 32034314 (-)
G2175918 NA non-coding upstream 20520 32174065 ~ 32176861 (-)
G2175940 NA non-coding upstream 36685 32190230 ~ 32190620 (-)
G2175945 NA non-coding upstream 43657 32197202 ~ 32197693 (-)
G2175946 NA non-coding upstream 44697 32198242 ~ 32198659 (-)
G2175982 NA non-coding upstream 108240 32261785 ~ 32262548 (-)
LOC110509376 LOC107567170 other downstream 413176 31736713 ~ 31738259 (-)
LOC110510037 LOC106563414 other downstream 422117 31726537 ~ 31731451 (-)
G2175503 NA other downstream 425017 31721952 ~ 31726394 (-)
G2175418 LOC106563537 other downstream 464409 31602449 ~ 31688677 (-)
G2175969 LOC100194703 other upstream 109738 32263283 ~ 32266089 (-)
cpi1 cpi1 other upstream 277965 32395346 ~ 32433641 (-)
G2176363 NA other upstream 489857 32643402 ~ 32644572 (-)
G2177695 NA other upstream 1357751 33511296 ~ 33512326 (-)

Expression


Co-expression Network