G2176166


Basic Information

Item Value
gene id G2176166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 32539620 ~ 32540096 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2487375
GACATGTTTGCTACACGATATCTATTGTTCCAGTTTTTAAAATCGATATTGACTGGGCTGCAGTGGAGATGGTAAGAAGCTTCGATATCATGGGGACCTAACTTCTATCGTCCTTTCCtggtacacccacacagacactgcAGTCAAATATGACAACCAGCGGCTCTCCGTCCTACAGTGGCGGAAGACGTTTTGCCTGACGTCAAACATTAACAAGAGTGTCAGATTGCAGTGACTGAAAAAATGTGAACAGAACCATAAGAGCAGATTACTTTTTTGTCATCTTTACTGGCACAGTTTTCAAATTTCAAATTGGAGTCACTTTCAATTGGTTCATTGACTCCAAGAACCATAGATTGTTTGTAGTTCATAACATTAACACAACTGACAAACGTTGCTTGACTGTAAATTGGGATACATGTTTTAATAACATTGGATATTTTATTGGGCTTAATGTTGCATACCTTGTGTTGTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2487375 True 477 lncRNA 0.39 1 32539620 32540096

Neighbor

gene id symbol gene type direction distance location
LOC110510077 LOC106563593 coding downstream 53278 32480854 ~ 32486342 (-)
LOC110510076 LOC106563637 coding downstream 68515 32461682 ~ 32471105 (-)
LOC110510075 LOC106563635 coding downstream 78982 32451347 ~ 32460638 (-)
cpi1 cpi1 coding downstream 106032 32395346 ~ 32433641 (-)
LOC110510074 LOC106563592 coding downstream 113682 32422996 ~ 32425938 (-)
LOC110510084 LOC106563605 coding upstream 110330 32650426 ~ 32660465 (-)
zgc:175280 LOC106563607 coding upstream 122196 32662292 ~ 32669370 (-)
LOC110510092 cssa11h3orf30 coding upstream 178282 32718378 ~ 32727002 (-)
si:dkey-251i10.1 LOC106563614 coding upstream 257529 32797625 ~ 32799913 (-)
LOC110510097 LOC106563615 coding upstream 260484 32800580 ~ 32813597 (-)
G2176153 LOC106563597 non-coding downstream 6249 32513406 ~ 32533371 (-)
G2176148 NA non-coding downstream 28789 32510142 ~ 32510831 (-)
G2176146 LOC106578716 non-coding downstream 31732 32507565 ~ 32507888 (-)
G2176142 NA non-coding downstream 39352 32499923 ~ 32500268 (-)
G2176141 NA non-coding downstream 40047 32498313 ~ 32499573 (-)
G2176167 NA non-coding upstream 147 32540243 ~ 32540467 (-)
G2176179 NA non-coding upstream 15707 32555803 ~ 32556106 (-)
G2176183 NA non-coding upstream 21145 32561241 ~ 32561458 (-)
G2176184 NA non-coding upstream 22394 32562490 ~ 32563057 (-)
G2176190 NA non-coding upstream 30756 32570852 ~ 32571378 (-)
LOC110510065 LOC106603070 other downstream 254137 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 273531 32263283 ~ 32266089 (-)
LOC110509376 LOC107567170 other downstream 801385 31736713 ~ 31738259 (-)
LOC110510037 LOC106563414 other downstream 810326 31726537 ~ 31731451 (-)
G2176363 NA other upstream 103306 32643402 ~ 32644572 (-)
G2177695 NA other upstream 971200 33511296 ~ 33512326 (-)
G2177991 cfb other upstream 1581386 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 1798815 34338911 ~ 34342460 (-)
G2178372 NA other upstream 2263095 34792330 ~ 34809382 (-)

Expression


Co-expression Network