G2176506


Basic Information

Item Value
gene id G2176506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 32931387 ~ 32932091 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2487759
GGGTATTACATATGATTAACAATAAACATACTAGTCAAGGCCTTGATAATTAACAACAAGAATACTAGTCAAGGCCTTGATGATTAACAGCAAAAATACTAGTCAAGCCTTGATGAATAATAGCAAACATACTAGTCAAGCCTTGATGAATAATAGCAAACATACTAGTCAAGGCCTTGCTGATTAACAGCAAACATACAAGTCAAGGCCTTGATGAATAATAGCAAACATACTAGTCAAGGCCTTGATGATTAACAGCAAACATACAAGTCAAGGCCTTGATGAATAATAGCAAACATACTAGTCAAGGCCTTGCTGATTAACAACAAGAATACTAGTCAAGTCCTTGgtgaacaaacacacaaacaaccaTTTGCAGGGAGTTGATTCTCTGTATAAGTAAGTGTTTACTTCAACAAACCACTTTTACTTTCACTCTCTAGTACTGGAAGCTTACCTAAACATTTccagttgttttctgtttttgttacCACAGGATATCTACATTATAAGATTCCCTGATCAGCAACAGTATGTTTCCCTTGCAAAACAATAATTCTATagggccctcaaactcaactggacctcgaagccagttccactgcgttTTTTCATTGTTGctttctaatcagggactggtttagacctgggaagGGATAGGGGGTTAACTTTTTGGGCAAAAACAACAGGCTACAAACCATAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2487759 True 705 lncRNA 0.37 1 32931387 32932091

Neighbor

gene id symbol gene type direction distance location
LOC118945341 NA coding downstream 15163 32905087 ~ 32916224 (-)
si:ch211-107p11.3 LOC106563619 coding downstream 87076 32842113 ~ 32844311 (-)
LOC110510097 LOC106563615 coding downstream 117790 32800580 ~ 32813597 (-)
si:dkey-251i10.1 LOC106563614 coding downstream 131474 32797625 ~ 32799913 (-)
LOC110510092 cssa11h3orf30 coding downstream 204385 32718378 ~ 32727002 (-)
LOC118945287 NA coding upstream 22768 32954859 ~ 32957801 (-)
kif20a LOC106563621 coding upstream 79147 33011238 ~ 33019372 (-)
trnaa-agc-231 NA coding upstream 88100 33020191 ~ 33020263 (-)
LOC110510107 djc18 coding upstream 108854 33040945 ~ 33058157 (-)
ecscr LOC106563624 coding upstream 130360 33062451 ~ 33066498 (-)
G2176470 NA non-coding downstream 70721 32860101 ~ 32860666 (-)
G2176465 NA non-coding downstream 80409 32850745 ~ 32850978 (-)
G2176464 NA non-coding downstream 81171 32850001 ~ 32850216 (-)
G2176443 NA non-coding downstream 104338 32826641 ~ 32827049 (-)
G2176442 NA non-coding downstream 105393 32825232 ~ 32825994 (-)
G2176515 NA non-coding upstream 14656 32946747 ~ 32947173 (-)
G2176544 NA non-coding upstream 54882 32986973 ~ 32987250 (-)
G2176549 NA non-coding upstream 58330 32990421 ~ 32990708 (-)
G2176550 NA non-coding upstream 58659 32990750 ~ 32990971 (-)
G2176552 NA non-coding upstream 61534 32993625 ~ 32993868 (-)
G2176363 NA other downstream 286815 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 497746 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 645904 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 665298 32263283 ~ 32266089 (-)
LOC110509376 LOC107567170 other downstream 1193152 31736713 ~ 31738259 (-)
G2177695 NA other upstream 579205 33511296 ~ 33512326 (-)
G2177991 cfb other upstream 1189391 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 1406820 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1871100 34792330 ~ 34809382 (-)
G2179862 NA other upstream 3029893 35961984 ~ 35962832 (-)

Expression


Co-expression Network