G2176550



Basic Information


Item Value
gene id G2176550
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 32990750 ~ 32990971 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2487804
cattccctaatcacactgaatgtatttagtcctctgtacccctccatgtctttgtgtgaaattgttttaTGTTATGTGGGTATTGTCACGCGCCAGACTTTTATGTTCCGTGTTTTGGGCACATTTATGTACTTATGTGCTTTTGTTTGGACTGGAATAAAAAGTGCACCTGTTaactacactctgctctcctgcacctgacttcgcctacAGTACACACCc

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2487804 True 222 lncRNA 0.42 1 32990750 32990971

Neighbor


gene id symbol gene type direction distance location
LOC118945287 NA coding downstream 32949 32954859 ~ 32957801 (-)
LOC118945341 NA coding downstream 74526 32905087 ~ 32916224 (-)
si:ch211-107p11.3 LOC106563619 coding downstream 146439 32842113 ~ 32844311 (-)
LOC110510097 LOC106563615 coding downstream 177153 32800580 ~ 32813597 (-)
si:dkey-251i10.1 LOC106563614 coding downstream 190837 32797625 ~ 32799913 (-)
kif20a LOC106563621 coding upstream 20267 33011238 ~ 33019372 (-)
trnaa-agc-231 NA coding upstream 29220 33020191 ~ 33020263 (-)
LOC110510107 djc18 coding upstream 49974 33040945 ~ 33058157 (-)
ecscr LOC106563624 coding upstream 71480 33062451 ~ 33066498 (-)
ppp3ca UBE2D2 coding upstream 75934 33066905 ~ 33205175 (-)
G2176549 NA non-coding downstream 42 32990421 ~ 32990708 (-)
G2176544 NA non-coding downstream 3500 32986973 ~ 32987250 (-)
G2176515 NA non-coding downstream 43577 32946747 ~ 32947173 (-)
G2176506 NA non-coding downstream 58659 32931387 ~ 32932091 (-)
G2176470 NA non-coding downstream 130084 32860101 ~ 32860666 (-)
G2176552 NA non-coding upstream 2654 32993625 ~ 32993868 (-)
G2176596 NA non-coding upstream 47973 33038944 ~ 33039150 (-)
G2176615 NA non-coding upstream 67798 33058769 ~ 33062428 (-)
G2176707 NA non-coding upstream 135576 33126547 ~ 33129922 (-)
G2176363 NA other downstream 346178 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 557109 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 705267 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 724661 32263283 ~ 32266089 (-)
LOC110509376 LOC107567170 other downstream 1252515 31736713 ~ 31738259 (-)
G2177695 NA other upstream 520325 33511296 ~ 33512326 (-)
G2177991 cfb other upstream 1130511 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 1347940 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1812220 34792330 ~ 34809382 (-)
G2179862 NA other upstream 2971013 35961984 ~ 35962832 (-)

Expression



Co-expression Network