G2176596



Basic Information


Item Value
gene id G2176596
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 33038944 ~ 33039150 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2487872
gggtgacagctttgagattggcctataattatttaaaagagttggatctccccttttaaaagtggtaggacaaatgctgatttccagatttggggaatttctttacattccagggttagattgaacagatatgtaagtggttcagctatgaaatcagctgccagatttaaaaagcagggatccaaaagatcaggacctgcaggcttt

Function


NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2487872 True 207 lncRNA 0.40 1 33038944 33039150

Neighbor


gene id symbol gene type direction distance location
trnaa-agc-231 NA coding downstream 18681 33020191 ~ 33020263 (-)
kif20a LOC106563621 coding downstream 19572 33011238 ~ 33019372 (-)
LOC118945287 NA coding downstream 81143 32954859 ~ 32957801 (-)
LOC118945341 NA coding downstream 122720 32905087 ~ 32916224 (-)
si:ch211-107p11.3 LOC106563619 coding downstream 194633 32842113 ~ 32844311 (-)
LOC110510107 djc18 coding upstream 1795 33040945 ~ 33058157 (-)
ecscr LOC106563624 coding upstream 23301 33062451 ~ 33066498 (-)
ppp3ca UBE2D2 coding upstream 27755 33066905 ~ 33205175 (-)
zgc:100829 LOC106563646 coding upstream 287560 33326710 ~ 33390385 (-)
puraa LOC107684715 coding upstream 387469 33426619 ~ 33434693 (-)
G2176552 NA non-coding downstream 45076 32993625 ~ 32993868 (-)
G2176550 NA non-coding downstream 47973 32990750 ~ 32990971 (-)
G2176549 NA non-coding downstream 48236 32990421 ~ 32990708 (-)
G2176544 NA non-coding downstream 51694 32986973 ~ 32987250 (-)
G2176515 NA non-coding downstream 91771 32946747 ~ 32947173 (-)
G2176615 NA non-coding upstream 19619 33058769 ~ 33062428 (-)
G2176707 NA non-coding upstream 87397 33126547 ~ 33129922 (-)
G2176709 NA non-coding upstream 90909 33130059 ~ 33133784 (-)
G2176712 NA non-coding upstream 125344 33164494 ~ 33165906 (-)
G2176363 NA other downstream 394372 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 605303 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 753461 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 772855 32263283 ~ 32266089 (-)
LOC110509376 LOC107567170 other downstream 1300709 31736713 ~ 31738259 (-)
G2177695 NA other upstream 472146 33511296 ~ 33512326 (-)
G2177991 cfb other upstream 1082332 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 1299761 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1764041 34792330 ~ 34809382 (-)
G2179862 NA other upstream 2922834 35961984 ~ 35962832 (-)

Expression



Co-expression Network