Gene
RNA
| Item | Value |
|---|---|
| gene id | G2176712 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 33164494 ~ 33165906 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2488056 | True | 582 | lncRNA | 0.50 | 2 | 33164494 | 33165906 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ecscr | LOC106563624 | coding | downstream | 97996 | 33062451 ~ 33066498 (-) |
| LOC110510107 | djc18 | coding | downstream | 106337 | 33040945 ~ 33058157 (-) |
| trnaa-agc-231 | NA | coding | downstream | 144231 | 33020191 ~ 33020263 (-) |
| kif20a | LOC106563621 | coding | downstream | 145122 | 33011238 ~ 33019372 (-) |
| LOC118945287 | NA | coding | downstream | 206693 | 32954859 ~ 32957801 (-) |
| zgc:100829 | LOC106563646 | coding | upstream | 160804 | 33326710 ~ 33390385 (-) |
| puraa | LOC107684715 | coding | upstream | 260713 | 33426619 ~ 33434693 (-) |
| LOC110509437 | NA | coding | upstream | 449612 | 33615518 ~ 33617217 (-) |
| slc22a6l | s22a6 | coding | upstream | 454137 | 33620043 ~ 33627271 (-) |
| pygma | LOC106563660 | coding | upstream | 472231 | 33638137 ~ 33651127 (-) |
| G2176709 | NA | non-coding | downstream | 30710 | 33130059 ~ 33133784 (-) |
| G2176707 | NA | non-coding | downstream | 34572 | 33126547 ~ 33129922 (-) |
| G2176615 | NA | non-coding | downstream | 102066 | 33058769 ~ 33062428 (-) |
| G2176596 | NA | non-coding | downstream | 125344 | 33038944 ~ 33039150 (-) |
| G2176729 | NA | non-coding | upstream | 26465 | 33192371 ~ 33192615 (-) |
| G2176730 | NA | non-coding | upstream | 26872 | 33192778 ~ 33193110 (-) |
| ppp3ca | UBE2D2 | non-coding | upstream | 30761 | 33066905 ~ 33205175 (-) |
| G2176734 | NA | non-coding | upstream | 32593 | 33198499 ~ 33200887 (-) |
| G2176753 | NA | non-coding | upstream | 74363 | 33240269 ~ 33240488 (-) |
| G2176363 | NA | other | downstream | 519922 | 32643402 ~ 32644572 (-) |
| cpi1 | cpi1 | other | downstream | 730853 | 32395346 ~ 32433641 (-) |
| LOC110510065 | LOC106603070 | other | downstream | 879011 | 32282188 ~ 32287263 (-) |
| G2175969 | LOC100194703 | other | downstream | 898405 | 32263283 ~ 32266089 (-) |
| LOC110509376 | LOC107567170 | other | downstream | 1426259 | 31736713 ~ 31738259 (-) |
| G2177695 | NA | other | upstream | 345390 | 33511296 ~ 33512326 (-) |
| G2177991 | cfb | other | upstream | 955576 | 34092047 ~ 34216247 (-) |
| LOC110510135 | LOC106563696 | other | upstream | 1173005 | 34338911 ~ 34342460 (-) |
| G2178372 | NA | other | upstream | 1637285 | 34792330 ~ 34809382 (-) |
| G2179862 | NA | other | upstream | 2796078 | 35961984 ~ 35962832 (-) |
