Gene
RNA
| Item | Value |
|---|---|
| gene id | G2176760 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 33244785 ~ 33245009 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2488106 | True | 225 | lncRNA | 0.47 | 1 | 33244785 | 33245009 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp3ca | UBE2D2 | coding | downstream | 48066 | 33066905 ~ 33205175 (-) |
| ecscr | LOC106563624 | coding | downstream | 178287 | 33062451 ~ 33066498 (-) |
| LOC110510107 | djc18 | coding | downstream | 186628 | 33040945 ~ 33058157 (-) |
| trnaa-agc-231 | NA | coding | downstream | 224522 | 33020191 ~ 33020263 (-) |
| kif20a | LOC106563621 | coding | downstream | 225413 | 33011238 ~ 33019372 (-) |
| zgc:100829 | LOC106563646 | coding | upstream | 81701 | 33326710 ~ 33390385 (-) |
| puraa | LOC107684715 | coding | upstream | 181610 | 33426619 ~ 33434693 (-) |
| LOC110509437 | NA | coding | upstream | 370509 | 33615518 ~ 33617217 (-) |
| slc22a6l | s22a6 | coding | upstream | 375034 | 33620043 ~ 33627271 (-) |
| pygma | LOC106563660 | coding | upstream | 393128 | 33638137 ~ 33651127 (-) |
| G2176753 | NA | non-coding | downstream | 4297 | 33240269 ~ 33240488 (-) |
| G2176734 | NA | non-coding | downstream | 43898 | 33198499 ~ 33200887 (-) |
| G2176730 | NA | non-coding | downstream | 51675 | 33192778 ~ 33193110 (-) |
| G2176729 | NA | non-coding | downstream | 52170 | 33192371 ~ 33192615 (-) |
| G2176775 | NA | non-coding | upstream | 9925 | 33254934 ~ 33255405 (-) |
| G2176778 | NA | non-coding | upstream | 12402 | 33257411 ~ 33257670 (-) |
| G2176785 | NA | non-coding | upstream | 17318 | 33262327 ~ 33262621 (-) |
| G2176789 | NA | non-coding | upstream | 21178 | 33266187 ~ 33266509 (-) |
| G2176790 | NA | non-coding | upstream | 21630 | 33266639 ~ 33266947 (-) |
| G2176363 | NA | other | downstream | 600213 | 32643402 ~ 32644572 (-) |
| cpi1 | cpi1 | other | downstream | 811144 | 32395346 ~ 32433641 (-) |
| LOC110510065 | LOC106603070 | other | downstream | 959302 | 32282188 ~ 32287263 (-) |
| G2175969 | LOC100194703 | other | downstream | 978696 | 32263283 ~ 32266089 (-) |
| LOC110509376 | LOC107567170 | other | downstream | 1506550 | 31736713 ~ 31738259 (-) |
| G2177695 | NA | other | upstream | 266287 | 33511296 ~ 33512326 (-) |
| G2177991 | cfb | other | upstream | 876473 | 34092047 ~ 34216247 (-) |
| LOC110510135 | LOC106563696 | other | upstream | 1093902 | 34338911 ~ 34342460 (-) |
| G2178372 | NA | other | upstream | 1558182 | 34792330 ~ 34809382 (-) |
| G2179862 | NA | other | upstream | 2716975 | 35961984 ~ 35962832 (-) |
