Gene
RNA
| Item | Value |
|---|---|
| gene id | G2176894 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 33382005 ~ 33383870 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| sporozoite surface protein 2-like, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2488246 | True | 806 | lncRNA | 0.50 | 2 | 33382005 | 33383870 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ppp3ca | UBE2D2 | coding | downstream | 185286 | 33066905 ~ 33205175 (-) |
| ecscr | LOC106563624 | coding | downstream | 315507 | 33062451 ~ 33066498 (-) |
| LOC110510107 | djc18 | coding | downstream | 323848 | 33040945 ~ 33058157 (-) |
| trnaa-agc-231 | NA | coding | downstream | 361742 | 33020191 ~ 33020263 (-) |
| kif20a | LOC106563621 | coding | downstream | 362633 | 33011238 ~ 33019372 (-) |
| puraa | LOC107684715 | coding | upstream | 42749 | 33426619 ~ 33434693 (-) |
| LOC110509437 | NA | coding | upstream | 231648 | 33615518 ~ 33617217 (-) |
| slc22a6l | s22a6 | coding | upstream | 236173 | 33620043 ~ 33627271 (-) |
| pygma | LOC106563660 | coding | upstream | 254267 | 33638137 ~ 33651127 (-) |
| LOC118945276 | NA | coding | upstream | 708439 | 34092309 ~ 34093015 (-) |
| G2176877 | NA | non-coding | downstream | 27581 | 33340148 ~ 33354424 (-) |
| G2176883 | NA | non-coding | downstream | 32107 | 33345269 ~ 33349898 (-) |
| G2176879 | NA | non-coding | downstream | 38394 | 33339167 ~ 33343611 (-) |
| G2176878 | NA | non-coding | downstream | 38726 | 33335260 ~ 33343279 (-) |
| G2176845 | NA | non-coding | downstream | 56432 | 33325302 ~ 33325573 (-) |
| G2176909 | NA | non-coding | upstream | 28389 | 33412259 ~ 33412489 (-) |
| G2176913 | NA | non-coding | upstream | 31325 | 33415195 ~ 33415419 (-) |
| G2176918 | NA | non-coding | upstream | 35143 | 33419013 ~ 33419605 (-) |
| G2177667 | NA | non-coding | upstream | 74683 | 33458553 ~ 33459092 (-) |
| G2177672 | NA | non-coding | upstream | 83481 | 33467351 ~ 33472908 (-) |
| G2176363 | NA | other | downstream | 737433 | 32643402 ~ 32644572 (-) |
| cpi1 | cpi1 | other | downstream | 948364 | 32395346 ~ 32433641 (-) |
| LOC110510065 | LOC106603070 | other | downstream | 1096522 | 32282188 ~ 32287263 (-) |
| G2175969 | LOC100194703 | other | downstream | 1115916 | 32263283 ~ 32266089 (-) |
| LOC110509376 | LOC107567170 | other | downstream | 1643770 | 31736713 ~ 31738259 (-) |
| G2177695 | NA | other | upstream | 127426 | 33511296 ~ 33512326 (-) |
| G2177991 | cfb | other | upstream | 737612 | 34092047 ~ 34216247 (-) |
| LOC110510135 | LOC106563696 | other | upstream | 955041 | 34338911 ~ 34342460 (-) |
| G2178372 | NA | other | upstream | 1419321 | 34792330 ~ 34809382 (-) |
| G2179862 | NA | other | upstream | 2578114 | 35961984 ~ 35962832 (-) |
