G2177748



Basic Information


Item Value
gene id G2177748
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 33595998 ~ 33597681 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2489215
tttttttcattttattttacaaTCTATGACAATCTCGCATTTGTACTTTTTTTCTAGCATATTCCTAGAATGGAGATGGGGGGGTATTTTTATTGCTGAATGTTAAATGAAATACACTTCCACTGACTGAAAATAAACTGACTGCTGCTTTTCACCACCATGCACCCATATACCTTGACCACAAGTACATGCAGAGGAGAGGTGTTGAAACATGTCAAGCAAgggaagaaaaataaaaacatgagaAACTGACAGGACGAACCTGGCAGCACTTCTATTGGGTGAGGAGGGGGGCAAGGTTggggaaatatcacatttaaactAGAACTACTGTCTTCTTTTGCATTTTTCAAACATACAAAATTACACTCAGAGTGTGAGAAACCGAAATGAGAGAAAATCCATTTGTGagatgtctacgtgtctacgtgtctttgtCAATGTGCCTTCATCTTACAGCCGTTGTGTTTTAAATCCTACTTATCAGTTTACTTTTGACCTAGACTCATCTGATGATTTTGTCCTGGTACAGTCATTTAATTTTTTTGGTTATATTTTAGAATGTATATAACCAGTTTTGCAGGATTATCAACAATCATTTCAAATGCATTGTCAGAACCATTTACTCCAACGTTTTTGACAGGTATGAAATTAACCTCCAAACCTGTTAGTGACATACTTCATAACAAGCAACATTATTATCCTTATCCACAAGACCGAGCAGCACTCAACATTAGTGAATGAGACCCTTTAAAGTGATTAGTCATTACTGTAGACTTGCGTGTTGCCTGCTTGGTCTGGACTCGGTGCGATAAGAATTCATGAACACAATCAGTCAATGGACATGAATCTGGGAATGAGGAAAGTTGACAATTTGAGCAAGCGCTGCATAACTGCATGAAAAATAAGAATGGCTATAAATATGTATTGATATCATGTTACTTCTCCTGCACAATAGGCATTACATAGGTTTCACACAACACACCTCTTAGAAAATGATGTCATCAAACAGAGCAAAATAGAAAGTTTGCATATTTTGGCATTTTATGATCCTCCAAAGTTTCACAGCTATTTCTCTTGCATTGGTTTAGTATGTTCGgctctactctattctgttctattctgttctattctgttctgttctgctctactctattctattatgttctgttccattctgttctgctctactctattctgttctgttctgttctgttctgctctactctattatattctattctgttctgctctactctattctattctgctctactctattctattctgttctattctgttctgttctgctctactctattctattctattctgttctgctctactctattctattctgctctactctattctattctgttctattctgttctgttctccactGAGATTccactctcctttccttctctttaGATGGGAGTGCTCAGAGGCATAGCATGTTGGGTGTGTTCTT

Function


NR:

description
keratin-associated protein 4-8-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2489215 True 1474 lncRNA 0.37 2 33595998 33597681

Neighbor


gene id symbol gene type direction distance location
puraa LOC107684715 coding downstream 161305 33426619 ~ 33434693 (-)
zgc:100829 LOC106563646 coding downstream 205613 33326710 ~ 33390385 (-)
ppp3ca UBE2D2 coding downstream 399279 33066905 ~ 33205175 (-)
ecscr LOC106563624 coding downstream 529500 33062451 ~ 33066498 (-)
LOC110510107 djc18 coding downstream 537841 33040945 ~ 33058157 (-)
LOC110509437 NA coding upstream 17837 33615518 ~ 33617217 (-)
slc22a6l s22a6 coding upstream 22362 33620043 ~ 33627271 (-)
pygma LOC106563660 coding upstream 40456 33638137 ~ 33651127 (-)
LOC118945276 NA coding upstream 494628 34092309 ~ 34093015 (-)
si:dkeyp-50d11.2 LOC106563699 coding upstream 566503 34164184 ~ 34171975 (-)
G2177735 NA non-coding downstream 20218 33575504 ~ 33575780 (-)
G2177726 NA non-coding downstream 32031 33563745 ~ 33563967 (-)
G2177725 NA non-coding downstream 32390 33563317 ~ 33563608 (-)
G2177722 NA non-coding downstream 38084 33557617 ~ 33557914 (-)
G2177719 NA non-coding downstream 46907 33548861 ~ 33549091 (-)
G2177757 NA non-coding upstream 11259 33608940 ~ 33610286 (-)
G2177781 NA non-coding upstream 64706 33662387 ~ 33674183 (-)
G2177816 LOC106563664 non-coding upstream 143035 33740716 ~ 33741839 (-)
G2177820 NA non-coding upstream 148547 33746228 ~ 33746627 (-)
G2177822 NA non-coding upstream 150987 33748668 ~ 33748886 (-)
G2177695 NA other downstream 83672 33511296 ~ 33512326 (-)
G2176363 NA other downstream 951426 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 1162357 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 1310515 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 1329909 32263283 ~ 32266089 (-)
G2177991 cfb other upstream 523801 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 741230 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1205510 34792330 ~ 34809382 (-)
G2179862 NA other upstream 2364303 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 2906792 36499597 ~ 36596534 (-)

Expression



Co-expression Network