G2177757


Basic Information

Item Value
gene id G2177757
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 33608940 ~ 33610286 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2489224
ggtagtagttgctaggcgcactggtttgtgtcaagaactgcaatgctcaatattttcctgtgtgtatcaagaatgtccaccacccaaaggacatccagccaacttgacacaactgtgggaagcattggagtcaacatgggtcaatgctttcgacaccttgtagaatccataccccgaagaattgaggctgttctgagggcatctcaatattatgaaggtgttcctaatatttggtatactcagtgtatgttggAGTTTGGGCTCTATGGTTACTCTTAATGACAATATGCTCATTCCTGGGAAAAAGACTAAGTGGAAAGGCATGCATAGTATTACTGCAAAAAATGCTTGATTGCTGTCCTTAGGGTCTATTTGTGTTAATGTGTACAGGAGATGGGCCACAGTCACAGTCATAAACCACCAATAAGCCATTGGTTAAAAAACAGTTGCTGTTTTGTTGCGCTTTGAGCTACTGGCGTTCTGTGCTTTTGTATTGATCTGGTTAACTATTGGATACGTCTTTGTATTGATCGGGTTAACTATTGGATACGTCTTTGTATTGATCTGGTTAACTATTGGATACGTCTTTGTATTGATCTGGTTAACTATTGGATACGTCTTTGTATTGATCGGGTTAACTATTGGATACGTCTTTGTATTGATCGGGTTAACTATTGGATACGTCTTTGTATTGATCGGGTTAACTATTGGATACGTCTTTGTATTGGTCTGGTTAACTATTGGATACGTCTTTGTATTGATCTGGTTAACTATTGGATACGTCTTTGTATTGATCTGGTTAACTATTGGATACGTCTTTGTATTGATCTGGTTAACTATTGGATACGTCTTTGTATTGATCGGGTTAACTATTGGATACGTCTTTGTATTGATCTGGTTAACTATTGGATACGTCTTTGTATTGATCGGGTTAACTATTGGATACGTCTTTGTCATTCAACAGTATCACCTTCAGTCTATCCTGATGGTATTTGAGTattttccaaaaacctgttttcgctttgtctttatggggtattgtgtgtagattaatgaggaacaaattgtatttaatccattttagaataaggctgtaacgtaacacaatgtggaaaaagtcaaggggtctgaatactttccgaatgcactgtatactgtacatagcCAGCACTGCCTATCCCCCACCGAAATGCTTTGACCCAGATAGTTGCTGTTCAGCGCGTAGTCTTGTTTTAGAAGGCACATTCG

Function

NR:

description
PREDICTED: titin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2489224 True 1248 lncRNA 0.39 2 33608940 33610286

Neighbor

gene id symbol gene type direction distance location
puraa LOC107684715 coding downstream 174247 33426619 ~ 33434693 (-)
zgc:100829 LOC106563646 coding downstream 218555 33326710 ~ 33390385 (-)
ppp3ca UBE2D2 coding downstream 412221 33066905 ~ 33205175 (-)
ecscr LOC106563624 coding downstream 542442 33062451 ~ 33066498 (-)
LOC110510107 djc18 coding downstream 550783 33040945 ~ 33058157 (-)
LOC110509437 NA coding upstream 5232 33615518 ~ 33617217 (-)
slc22a6l s22a6 coding upstream 9757 33620043 ~ 33627271 (-)
pygma LOC106563660 coding upstream 27851 33638137 ~ 33651127 (-)
LOC118945276 NA coding upstream 482023 34092309 ~ 34093015 (-)
si:dkeyp-50d11.2 LOC106563699 coding upstream 553898 34164184 ~ 34171975 (-)
G2177748 NA non-coding downstream 11259 33595998 ~ 33597681 (-)
G2177735 NA non-coding downstream 33160 33575504 ~ 33575780 (-)
G2177726 NA non-coding downstream 44973 33563745 ~ 33563967 (-)
G2177725 NA non-coding downstream 45332 33563317 ~ 33563608 (-)
G2177722 NA non-coding downstream 51026 33557617 ~ 33557914 (-)
G2177781 NA non-coding upstream 52101 33662387 ~ 33674183 (-)
G2177816 LOC106563664 non-coding upstream 130430 33740716 ~ 33741839 (-)
G2177820 NA non-coding upstream 135942 33746228 ~ 33746627 (-)
G2177822 NA non-coding upstream 138382 33748668 ~ 33748886 (-)
G2177830 NA non-coding upstream 151878 33762164 ~ 33764067 (-)
G2177695 NA other downstream 96614 33511296 ~ 33512326 (-)
G2176363 NA other downstream 964368 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 1175299 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 1323457 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 1342851 32263283 ~ 32266089 (-)
G2177991 cfb other upstream 511196 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 728625 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1192905 34792330 ~ 34809382 (-)
G2179862 NA other upstream 2351698 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 2894187 36499597 ~ 36596534 (-)

Expression


Co-expression Network