G2177781


Basic Information

Item Value
gene id G2177781
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 33662387 ~ 33674183 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2489250
GTCTGGATCTGACTCATCAAATCAAAACTTTTATTAGCAAACATGAATGAAGATAAATAGCCACCGAAAACTGTACAAGtatttacaaaacaacaaattgGTCATGGCAACAAAAGGATATACACAAATAACacttgtcgtgtctttactatcattaaatgaagacttttagtttttatcaaagattctccgTAATTAGCATTTTGTGATTAACTAATCAGGCAAATggaattaactaggaagtcggggcaccaaggaaaatattcagattacaaagttataattttcctaatatacaatttcagatattttaatatctgatcaattagtatTCTGATTAATGACTTATTCTTTATTTTACCTcacattagtctcattccaaacgtcgtaaattgttggttatctgcacaaacccagtctttgctatgagtcatccatacatcaattgtcttaaatcatttatttactaactaagtaattcacagaaatacataaacaaacagtagatagttacaaggaGACGATAACAgagtttccctagtgggataaaccggtATCGCGGCTTGGTGTACAAAAGGGAAGTTGGGTGTCGACTGagataagacaacacacagttgataattataatagttcagagtgacattcatgtcgttatggatagatgtttcggcggttgtcggtcttcgcgttcaatgataccgaattcctagctgtaaactagtaattaatatcaaagacttgttcttattctgtcggtatcgatagtctaagagtttaaccacttgggatggttaaaagattcagccatctactcaaaccttggccctctcgttatcgaggtaagctggtctcaacctttgtcctctcgtaattgagggaaacatggtctgttgagaaaaTCTTACGGTCGGGGTTATATTCGGAAGAACAGAAAAAGCTGTCTCATGAAGCCAGGTCcgaactgggctcatgggcggtcctccgATTTAAttaaactccaaagggaattggagtttccttcattaaacagtccaaaatcacattacacaattttacaaacagtatcatcctcactcattcatcttatacaacaagtAGATGTAAACATCATATCTGAGGCTCTtatataaacagtgttatggtaatgtggtcgtattgtctcccatgagtttcacaaaattgtaccaaacggaccagttcgtagctggattcttcacagatcttttataccttctccagaacataaatgttgttcggacctcaagttctgtgaggtggaagaaattcatTTGTTCTCTTCTATGAAaactctactgtctctctatactgtggccatgaggagatcatctcctccaggaattcatgacctctctctgaccacagcagcctgggtgtaggagacagggagagggggatggggcttgctgtatcCAAAGAGGGCAATGTCATGACAcaatcttcaaccaaaacccagCAGTTTGCCAACAAACAATGACATGATTTAAGTACACATACCCACAATGCATCAGCCAATGGGAGGAAGACCTGACACAATGATCAATTGATATTCACAATACAttaaatacaatacaacatgtatacagCACACGTCAATAAACTCTAACACAAGTTTCTTCTCTCTTTCACAGATGATCATCAATCAAAATAGCATCGCTAACCACACAATTACAATTAATAAATGTGTTTCTTATAAATCATTAACCGTTTGCAATGTCTGCTTATTGAGACTAAGGCCTAGCTTTAGATGAGGTGACAGTGGACATGAGGAGGATCATCAcagtatggtttcctagaaacaagggtggctcaattTAACCCTTTGGCTCAACTAACTCCACTCTCCACTATAGGGAACGTTACCACAATAGGAACAGGACTAGCCATTGTGAGATGGCTTCAGTTGTCACAGACCAGTAACAGCCCACAGGATACCCGGTGTGGAGTTACTATGGTGACAAATCCTCAGCTGGACCCAGGTAGCCTACCACAGTTTAAGTTGGCAGGAGTCATCAACACCTGAAGGCTGTGAGTTTGCAAAATGAGTGGTTCAGATAAGGAcagaacaaagtgttaaacatttACTTCATTttgcagacgcttttatccagagtgacttacaggagcaattaggggcAGATGGAAAGAGCTTTCACATATTCAtttcagggatttgaaccagctaCCTTTTGGGTACTGGCCCAATGCCACCAGATTACCTGCCTCCAACATGATCAATATCTTTAATTCTCACAGTATCTACAAAAGTTAGTTGAAATAAAATGCTTTAAATTGGAATCTGTTTGAAAGTGGAAATAAGGCATTTAAACTGGGTTTCAGAGTTGATAACTGCATAACATTTATTTAGGATAAATCCCAATATTTTTTACATGTCACCACATTCAGAATTTTTTATCAGTTTGGAATatatttcaaaatgatagtttaaaATGTAGTACAAAGGTAGAACAAACCTCTGGAGTGGTTTCTGTAGTATGATATTACTatatttataattttatattttaaaaTCATTTTCAGTATGTCTGTCTTTTAAATTGTACCACAGGATTGTCTAGTTGAGGAAATAACATCAATTGATCTTGTCATTAACAATCCACTCCCACATTTTTCCACCTCAACTAGACCACACAAACAGGGCAACACTAAAAACAGGGAATGTAAAAAGGCAGTGGTAGCCTACACTATCCAGTGTTGTCACACACAAACAGCCTCATCTAGTGGAGAAGCAATCTTCTGCAGTCATGAaccacatacaaatacacacagggatatgcatatactgtaggtTTACCTACTGTGAAAGCTGTGAGCAAATAATATGATGTTGAAGGATGAATAAAGGATGAATCCATCAGAAATGGATCAATCTATCAGATGAAGGATGAATCAATCAGATGAAGGAAGAATTTTAAAAATCCTTCCTCAGATTCGAAATGCTCTTAAACTGGAAAATTGGAATGTTCCTAACATGCGTTGTATCTTCAAACAGGAGCATAACGTTTCCTGAGATCTTCAGAGTGCTGCTGCTGCATGGAACATGGGCAGTCATTGTTGTTTTTCTCCTCAATGTTGGTCTTTATTCTCCTCAAAGGTGGACATCAAACACTTCATCCCCCAGGGAGTCAGGAGCTTCCTCTGtaatgaCTGTATGTTGTACAGTGTGTAACTGCTGAGCTATAGCAGGCACACTGAAGGAACGGAAGTGTTGGGGAGAATGGTATTCGGGACAGGTGCTCTGTGTTCGTTTGCGGCACTCCACAGCAAGGCGGCTGCGACAATCTTTGTGGCAGCTCACCCCACAGGCTTTACACTTGTATCTTTGTTTGTAAAATCCCCACATGATGCCTTTACAGTGATGGCAAAGCATAGGCTTCATGCAGGTCTTCTCTGAAAATGTGTGGATGAACCCCATCTTGCTGTTCAGTAAAGAGCTGGCCTTGGTGAAGTAGTCGATCATCTCCTCCTGACTGATTCTGCCGTCCTGATTCTTATCCAGGTCGTCAAACTTGCAGAGGTATGGGAAGTTAGTCCTAATGATCTCAAATTCCTCCTGAGTGACGTAGCCGTCTCCATCAGTGTCAAAATTCTTAAACACAGACTCTACCATCTTCTGTATGTGTTTACTGATGATGGTGGGGTCAGCTTTGGGCTTCACTGAAGATGCCCACTCTTCTATCATAGGTGGGCTTGGGGTAGACAATGGCCTGGCTGTGCGGGGCTCCCTCTGCAGGGACAGCTGATATATCTCTTCCTCTGAGTGATACTGGTCCAGAGACACCATGAGCAGGTTGAGCAGGTCCATGTTGGCATCAACGCTGGGTGGCATGGTCTGGATCAGCGCAAGCTCCTGGAGGATGGCATACAGCTGTTGGGTCTTGGCCAGGTTGACCTGCGTCTTCTCCCGGTCACTCCAGTCGGGCAGGGCAACGTGCACAGCAATCAGGTCCTTGAGGTGCACACCCAGGATGGGGAAACGGAAGCCTGTGCTCTCTGAGAAGCGCTGGCGGTACTGGCTATAGTTCCCACAGGATGTCACAAGCTCCACCAGGTTGTTGAACACCTTGCTCACATCGTTGCtgatgtgtgactgtgtgtctttGAGGCGTGAGATGGAGCTGTTACTGAGACCCCCCACTACTGCCATCAGAGTGTTGAAGTTCTGAAGCTGTAACAACCTCTGTGCGACCCTAATAAAATGGGAGATGACTGCAGCCCTCTGGGGGGCGGTGGGCTTGCTGAGCACCATCAGCTGGATCCACTGAGACACGCTGTTGAAGAGGGTGATGAAGCGCTCCAGGATGGGGTTATCCACTGTGCAGCCATGCATCACAAAGCTGTGGTAGTCCTGGAACAGTATCCTACAGAAGGACTTATACTCCATGTAGGTGAGGTGCTCTGCTAGTTCAGATGAGTCCAGGTGATCAAAGAGGAGAGACGTCTTCCTCTTCTTGAAATCAGACTGAGCTGGTTGGCTCACCTGCCTACTCCACTCATATGACGGCACACTGTCAACGTTGATGAGTGTGCTCTGGTGCTCCTCTCCCTGCTGAGCCAGCTGCTCCTTCAGCCTTCTGATCTGCTCTGCCAGCTCTGGGTTCAGGTCAAACTCTGCTGGGAACTCGCTGATCCAGTACTTGATAAGATGGCAGATTTGTGACCTGAGTTCAGGCAGACAGTTTTCCTCCAGCGACTTGCTGGAGAGTTTCTTGGCCAGGTCAGCAGAGGAGAGGTACCATGGATGCATCATGAGAAACATCCGGACCAGAGACTCATCAACTGTAGCCGACTGATCTAGTTTGATAGACTTCATCCTCCTCTGGTTCTCTCTCCAAcagtcctctctgttctctcctccgtTGACACATACACAGTGAGACTGTGATGAGGTTTGGGATTTAGAAGAATGGCTGTGTTCTCTATTCTGTTGGGCAACCTTCCAACAGAGTCCTCTGATGAGTCTCTTAGTCCTCAGGCAGGCAGCTACTCTGCTCCAGTCAACAAGCCAAGAAAGTCTCTTCCTCTTTATGAAAGCTTTTAGTTTGTGTGCTTCCTGCCCCACCTTAAAACAAGAACATTGGTATAGTCATGAAAACCCCCAAAACCCAGTTGAGAGTTGGCCTTTAGCAATTCAGTATTCAATTGTTTGCTTACTGATGATAATACAAACAAAACTGTTTTGTGACACAAGAACCTGCAATATGGCAAAACTAATTCACCCTCTACATACACTATCTATCTGATTATTAATGATGAAAGGAAAAGATAATCCCAGCCAAACGATTACCCATCAGACAGTGTGTTGGTGGCTCTTTTC
>TU2489251
CCAGGTTGGTGATTATTTTCTGACCTGGTAGTTGACTCTTTCTGAGCTGGGAGCTTACTCTTTCTGATTTGGGAGTTGACCCTTTGTGACCTGGAAGTTGACTTTTTCTGACCTGGTAGTTGACCTTTTCTGATCTGGGAGTTGATTCATTGACCTGGGACTGGGAGTGATTCATTGACCTGGGACTGGGAGTTGATTAATTGACCTGGGGATGGGAGTTGATTCATTGACCTGGGACTGGGAGTTGATTCATTGACCTGAGACTGGGAATTGATTCAttgacctgagactgggagttgATTAATTTACCTGGGACTGGGAGTTGATTCATTGACCTGGGACTGGGAGTTGATTCATTAACCTGGGACAGGAAGTTGATTCATTGACCTGGGACTGGGAGTTGATTCCTTGACCTGGGACTGGGAGTTGATTCATTGACTTGGGACAGGGAATTGATTGACTGACCTGTGCGACCCTAATAAAATGGGAGATGACTGCAGCCCTCTGGGGGGCGGTGGGCTTGCTGAGCACCATCAGCTGGATCCACTGAGACACGCTGTTGAAGAGGGTGATGAAGCGCTCCAGGATGGGGTTATCCACTGTGCAGCCATGCATCACAAAGCTGTGGTAGTCCTGGAACAGTATCCTACAGAAGGACTTATACTCCATGTAGGTGAGGTGCTCTGCTAGTTCAGATGAGTCCAGGTGATCAAAGAGGAGAGACGTCTTCCTCTTCTTGAAATCAGACTGAGCTGGTTGGCTCACCTGCCTACTCCACTCATATGACGGCACACTGTCAACGTTGATGAGTGTGCTCTGGTGCTCCTCTCCCTGCTGAGCCAGCTGCTCCTTCAGCCTTCTGATCTGCTCTGCCAGCTCTGGGTTCAGGTCAAACTCTGCTGGGAACTCGCTGATCCAGTACCTTACGGTGCAgtatggagaggagaggcggggTTTACAGGGACAGAAGGGTAGGACAGGAGAAGTTAGTGTTGTCATTTCTGTCTCGGAGCCAGAGAGTGTGGAAATCATATACCTACATGGAGATCATATACCTAcaatggcaagaaaaagtatgtgaaccc

Function

NR:

description
RAS guanyl-releasing protein 2

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU2489250 False 5356 lncRNA 0.43 17 33662387 33674183
TU2489251 True 1085 lncRNA 0.50 3 33664979 33666446

Neighbor

gene id symbol gene type direction distance location
pygma LOC106563660 coding downstream 11260 33638137 ~ 33651127 (-)
slc22a6l s22a6 coding downstream 35116 33620043 ~ 33627271 (-)
LOC110509437 NA coding downstream 45170 33615518 ~ 33617217 (-)
puraa LOC107684715 coding downstream 227694 33426619 ~ 33434693 (-)
zgc:100829 LOC106563646 coding downstream 272002 33326710 ~ 33390385 (-)
LOC118945276 NA coding upstream 418126 34092309 ~ 34093015 (-)
si:dkeyp-50d11.2 LOC106563699 coding upstream 490001 34164184 ~ 34171975 (-)
LOC110510130 LOC106563702 coding upstream 544450 34218633 ~ 34226881 (-)
LOC110510131 dpp3 coding upstream 561493 34235676 ~ 34250665 (-)
il2rc2 il2rc2 coding upstream 583633 34257816 ~ 34268485 (-)
G2177757 NA non-coding downstream 52101 33608940 ~ 33610286 (-)
G2177748 NA non-coding downstream 64706 33595998 ~ 33597681 (-)
G2177735 NA non-coding downstream 86607 33575504 ~ 33575780 (-)
G2177726 NA non-coding downstream 98420 33563745 ~ 33563967 (-)
G2177725 NA non-coding downstream 98779 33563317 ~ 33563608 (-)
G2177816 LOC106563664 non-coding upstream 66533 33740716 ~ 33741839 (-)
G2177820 NA non-coding upstream 72045 33746228 ~ 33746627 (-)
G2177822 NA non-coding upstream 74485 33748668 ~ 33748886 (-)
G2177830 NA non-coding upstream 87981 33762164 ~ 33764067 (-)
G2177832 NA non-coding upstream 92327 33766510 ~ 33766721 (-)
G2177695 NA other downstream 150061 33511296 ~ 33512326 (-)
G2176363 NA other downstream 1017815 32643402 ~ 32644572 (-)
cpi1 cpi1 other downstream 1228746 32395346 ~ 32433641 (-)
LOC110510065 LOC106603070 other downstream 1376904 32282188 ~ 32287263 (-)
G2175969 LOC100194703 other downstream 1396298 32263283 ~ 32266089 (-)
G2177991 cfb other upstream 447299 34092047 ~ 34216247 (-)
LOC110510135 LOC106563696 other upstream 664728 34338911 ~ 34342460 (-)
G2178372 NA other upstream 1129008 34792330 ~ 34809382 (-)
G2179862 NA other upstream 2287801 35961984 ~ 35962832 (-)
LOC110510209 LOC106563761 other upstream 2830290 36499597 ~ 36596534 (-)

Expression


Co-expression Network