Gene
RNA
| Item | Value |
|---|---|
| gene id | G2177112 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 33767745 ~ 33769208 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2488498 | True | 1436 | lncRNA | 0.37 | 2 | 33767745 | 33769208 |
33,764,400
33,764,800
33,765,200
33,765,600
33,766,000
33,766,400
33,766,800
33,767,200
33,767,600
33,768,000
33,768,400
33,768,800
33,769,200
33,769,600
33,770,000
33,770,400
33,770,800
33,771,200
NC_048593.1
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| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rasgrp2 | grp2 | coding | upstream | 93578 | 33661997 ~ 33674167 (+) |
| LOC110510121 | NA | coding | upstream | 132357 | 33627367 ~ 33635388 (+) |
| epdl2 | LOC106563665 | coding | upstream | 153646 | 33611933 ~ 33614099 (+) |
| nrg2a | LOC106563662 | coding | upstream | 172989 | 33436489 ~ 33594756 (+) |
| cxxc5a | LOC106563628 | coding | upstream | 532327 | 33212994 ~ 33235535 (+) |
| LOC110510124 | LOC106602987 | coding | downstream | 76627 | 33845835 ~ 34089064 (+) |
| LOC110510125 | LOC106563697 | coding | downstream | 336713 | 34105921 ~ 34135553 (+) |
| cfbl | cfb | coding | downstream | 376195 | 34145403 ~ 34155439 (+) |
| bbs1 | bbs1 | coding | downstream | 387501 | 34156709 ~ 34163950 (+) |
| pacs1a | LOC106563701 | coding | downstream | 409623 | 34178831 ~ 34195217 (+) |
| G2177111 | NA | non-coding | upstream | 443 | 33766257 ~ 33767302 (+) |
| G2177098 | NA | non-coding | upstream | 22842 | 33744673 ~ 33744903 (+) |
| G2177095 | NA | non-coding | upstream | 24636 | 33742905 ~ 33743109 (+) |
| LOC118945288 | LOC106563664 | non-coding | upstream | 27210 | 33675566 ~ 33814591 (+) |
| G2177092 | NA | non-coding | upstream | 31268 | 33734868 ~ 33736477 (+) |
| G2177116 | NA | non-coding | downstream | 9462 | 33778670 ~ 33782010 (+) |
| G2177119 | NA | non-coding | downstream | 14898 | 33784106 ~ 33788760 (+) |
| G2177123 | NA | non-coding | downstream | 22477 | 33791685 ~ 33791908 (+) |
| G2177126 | NA | non-coding | downstream | 42091 | 33811299 ~ 33811498 (+) |
| G2177128 | NA | non-coding | downstream | 44146 | 33813354 ~ 33813561 (+) |
| LOC110509425 | LOC106563572 | other | upstream | 1641667 | 32115629 ~ 32150579 (+) |
| G2175413 | NA | other | upstream | 1730009 | 32037047 ~ 32037736 (+) |
| LOC110509422 | LOC106563560 | other | upstream | 1866509 | 31820484 ~ 31908546 (+) |
| G2175233 | psmb6 | other | upstream | 2156276 | 31610544 ~ 31611469 (+) |
| LOC110510132 | rin1 | other | downstream | 462448 | 34227307 ~ 34236487 (+) |
| G2177424 | NA | other | downstream | 590416 | 34359624 ~ 34460769 (+) |
| LOC110510159 | LOC106563679 | other | downstream | 1033731 | 34784319 ~ 34825545 (+) |
| ndufa2 | ndua2 | other | downstream | 1736640 | 35505848 ~ 35507048 (+) |
