Gene
RNA
| Item | Value |
|---|---|
| gene id | G2177836 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 33789389 ~ 33789605 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2489310 | True | 217 | lncRNA | 0.35 | 1 | 33789389 | 33789605 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pygma | LOC106563660 | coding | downstream | 138262 | 33638137 ~ 33651127 (-) |
| slc22a6l | s22a6 | coding | downstream | 162118 | 33620043 ~ 33627271 (-) |
| LOC110509437 | NA | coding | downstream | 172172 | 33615518 ~ 33617217 (-) |
| puraa | LOC107684715 | coding | downstream | 354696 | 33426619 ~ 33434693 (-) |
| zgc:100829 | LOC106563646 | coding | downstream | 399004 | 33326710 ~ 33390385 (-) |
| LOC118945276 | NA | coding | upstream | 302704 | 34092309 ~ 34093015 (-) |
| si:dkeyp-50d11.2 | LOC106563699 | coding | upstream | 374579 | 34164184 ~ 34171975 (-) |
| LOC110510130 | LOC106563702 | coding | upstream | 429028 | 34218633 ~ 34226881 (-) |
| LOC110510131 | dpp3 | coding | upstream | 446071 | 34235676 ~ 34250665 (-) |
| il2rc2 | il2rc2 | coding | upstream | 468211 | 34257816 ~ 34268485 (-) |
| G2177834 | NA | non-coding | downstream | 14696 | 33773661 ~ 33774693 (-) |
| G2177832 | NA | non-coding | downstream | 22668 | 33766510 ~ 33766721 (-) |
| G2177830 | NA | non-coding | downstream | 25322 | 33762164 ~ 33764067 (-) |
| G2177822 | NA | non-coding | downstream | 40503 | 33748668 ~ 33748886 (-) |
| G2177820 | NA | non-coding | downstream | 42762 | 33746228 ~ 33746627 (-) |
| G2177844 | NA | non-coding | upstream | 27675 | 33817280 ~ 33817533 (-) |
| G2177848 | NA | non-coding | upstream | 30950 | 33820555 ~ 33820789 (-) |
| G2177849 | NA | non-coding | upstream | 31233 | 33820838 ~ 33821159 (-) |
| G2177865 | NA | non-coding | upstream | 55590 | 33845195 ~ 33845399 (-) |
| G2177866 | LOC106563664 | non-coding | upstream | 56233 | 33845838 ~ 33846130 (-) |
| G2177695 | NA | other | downstream | 277063 | 33511296 ~ 33512326 (-) |
| G2176363 | NA | other | downstream | 1144817 | 32643402 ~ 32644572 (-) |
| cpi1 | cpi1 | other | downstream | 1355748 | 32395346 ~ 32433641 (-) |
| LOC110510065 | LOC106603070 | other | downstream | 1503906 | 32282188 ~ 32287263 (-) |
| G2175969 | LOC100194703 | other | downstream | 1523300 | 32263283 ~ 32266089 (-) |
| G2177991 | cfb | other | upstream | 331877 | 34092047 ~ 34216247 (-) |
| LOC110510135 | LOC106563696 | other | upstream | 549306 | 34338911 ~ 34342460 (-) |
| G2178372 | NA | other | upstream | 1013586 | 34792330 ~ 34809382 (-) |
| G2179862 | NA | other | upstream | 2172379 | 35961984 ~ 35962832 (-) |
| LOC110510209 | LOC106563761 | other | upstream | 2714868 | 36499597 ~ 36596534 (-) |
