Gene
RNA
| Item | Value |
|---|---|
| gene id | G2178146 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 34325439 ~ 34325667 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tc1 transposase |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2489656 | True | 229 | lncRNA | 0.55 | 1 | 34325439 | 34325667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| il2rc2 | il2rc2 | coding | downstream | 56954 | 34257816 ~ 34268485 (-) |
| LOC110510131 | dpp3 | coding | downstream | 74774 | 34235676 ~ 34250665 (-) |
| LOC110510130 | LOC106563702 | coding | downstream | 98558 | 34218633 ~ 34226881 (-) |
| si:dkeyp-50d11.2 | LOC106563699 | coding | downstream | 153464 | 34164184 ~ 34171975 (-) |
| LOC118945276 | NA | coding | downstream | 232424 | 34092309 ~ 34093015 (-) |
| LOC110510135 | LOC106563696 | coding | upstream | 13245 | 34338911 ~ 34342460 (-) |
| LOC110510139 | LOC106563695 | coding | upstream | 36842 | 34362509 ~ 34384584 (-) |
| trnas-gcu-266 | NA | coding | upstream | 220637 | 34546304 ~ 34546385 (-) |
| hif1al2 | LOC106563688 | coding | upstream | 221114 | 34546781 ~ 34565141 (-) |
| LOC110510152 | LOC106563684 | coding | upstream | 294291 | 34619958 ~ 34629302 (-) |
| G2178128 | NA | non-coding | downstream | 21305 | 34303931 ~ 34304134 (-) |
| G2178124 | NA | non-coding | downstream | 23746 | 34301459 ~ 34301693 (-) |
| G2178121 | NA | non-coding | downstream | 26714 | 34298442 ~ 34298725 (-) |
| G2178120 | NA | non-coding | downstream | 27383 | 34297846 ~ 34298056 (-) |
| G2178102 | NA | non-coding | downstream | 59911 | 34260510 ~ 34265528 (-) |
| G2178155 | NA | non-coding | upstream | 18499 | 34344166 ~ 34344415 (-) |
| G2178157 | NA | non-coding | upstream | 23220 | 34348887 ~ 34349153 (-) |
| G2178162 | NA | non-coding | upstream | 30304 | 34355971 ~ 34356270 (-) |
| G2178219 | LOC106563694 | non-coding | upstream | 126993 | 34452660 ~ 34455530 (-) |
| G2178229 | NA | non-coding | upstream | 143723 | 34469390 ~ 34469626 (-) |
| G2177991 | cfb | other | downstream | 178120 | 34092047 ~ 34216247 (-) |
| G2177695 | NA | other | downstream | 813113 | 33511296 ~ 33512326 (-) |
| G2176363 | NA | other | downstream | 1680867 | 32643402 ~ 32644572 (-) |
| cpi1 | cpi1 | other | downstream | 1891798 | 32395346 ~ 32433641 (-) |
| LOC110510065 | LOC106603070 | other | downstream | 2039956 | 32282188 ~ 32287263 (-) |
| G2178372 | NA | other | upstream | 477524 | 34792330 ~ 34809382 (-) |
| G2179862 | NA | other | upstream | 1636317 | 35961984 ~ 35962832 (-) |
| LOC110510209 | LOC106563761 | other | upstream | 2178806 | 36499597 ~ 36596534 (-) |
| G2180120 | NA | other | upstream | 2180873 | 36506540 ~ 36507120 (-) |
