G2177426


Basic Information

Item Value
gene id G2177426
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 34362522 ~ 34364420 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2488846
ATTTTATTCAGTGCATTTTCGTTAGAACAACAAATAACCTACTGCAAGAAGGTACCAGATTAAAAGTGTATCTGTGCTCTGTGGATCATTCACTTGTAGTCTGGTATAGACTGGAGCACAGCGTCCAAAACAGGTAGATAATAAGcatagtagacctacagtacatcaTGCTGCTATTTCCCAGAGGTCCACAGTCTCTCATGCAATAAtagtgtcaatcaatcaatcaaaatgATAGACATAAGCATCTATTCGGCtccagggggaaaaaacaatgcaGGAGAATACAAACAATCATTTAATCTGTAAGAGCCCTCAATTTCACTAATAATCCCCATTtgatggtaaaataaaaaatcaagGATTATGTTAATatcctttcacacacacacacagacaaaggacTGAATACATCTAAATACCATATGAAATGTTGTTTATAGTTTGTCAAAGGAGACTACTAATGACACAATACAACTACTCTGCTTCTCTGTTGTATTATTAAAACAAGTTGCTGTGGACCACACATTGTCTGTGTCTCCCCTCGCCTCCTTGTGTTGTAACTCGTAGACTGATGGGTATGCCAAAATAGAACGCTTCATAGTATGACACATTTTGAAaatgctttaaatgccaggatgtcatgCTATTGAGGAAGAGATTGGTATTTTTAGACCCACGTGTGTTTGACAACATATCAGCTGATAATCAGAAAAGGGGGGGATGGGTTGTACCAAAACGAATGAATGTCGGAAAACAACGCAATTGTGCATTAGATGatgcattctcagtatgggggagcctagtatgttgatatttgttgCTTACTGCATAAATGTTTACTAAACAGTATgttctaaatagtatgtagtacgATTAGTACACACTACACCGTTTGTAGTACGATTGGTACACACTACACCGTTTGTAGTACGATTGGTACACACTACACCGTTTGTAGTACGATTAGTACACACTACACCGTTTGTAGTACGATTGGTACACACTACACCGTTTGTAGTACGATTGGTACACACTACACCGTTTGTAGTACGATTAGTACACACTACACCGTTTGTAGTACGATTGGTACACACTACACCGTTTGTCGTTTTAGTAGTAGATACGACAGATTTAGGACATGGCCTATGCTTGTGATtcgatttctttctttcttcctttctttctttgcCTTGAGTAAAACTAGAGAAACACGCTTGACTCTTTGGTACACAGGAACAAATGATCGCAATCAGTATAGCTGGCAAGCAATTTATATGGTAGACGAGGCAGAAGGCTTGCAGATATGTACACCTTGGACTCAAACACAGAAAAAAGCTTTTTTTAGGAGGCATGAAAGCAACAGTTGATGGACCACATAAATACTGACCAGTAACTCTCCCTCTCAAGACCTTCAGAGAGATATACATTGGTAATACACTACATATGCTCAAGAATACAAGGAAGAATATAAATTCCAGACCAGCAAAATGGCTTTTCGTATCGAAGTTCATAGCAAAGTTGACCCGCAGAAGCTCACTCATGGAATTATTTAATTGATGATGTCATAGTCTGTCACAGTGGTTTCAGTACACACTAAGCTAAGCTAATTTGCTTCCTCTCCacctgttcagtgtgatgagGATCAGTTGAGTCTGCTTACAGTGAGAACCGCCCTCTGCCTGACGCTGACCACCACAGCTATGTGGACTGCTCGTTCTGGCTCAGTGTCTTCCCTCCTCCGTTCAGCAGGGCTGATGCACTACGGCTCTTGGTGGGAGTACCGCTGCCGGAGTGGGAGAACTCGGTCAGATCATGGAGAGAGGGTTCCCTGTACAT

Function

NR:

description
Y' element ATP-dependent helicase YJL225C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2488846 True 1839 lncRNA 0.41 2 34362522 34364420

Neighbor

gene id symbol gene type direction distance location
LOC110510136 LOC106602966 coding upstream 26781 34329181 ~ 34335741 (+)
LOC110509380 NA coding upstream 59175 34299885 ~ 34303347 (+)
LOC110510134 LOC106563705 coding upstream 71968 34279612 ~ 34290554 (+)
LOC110510132 rin1 coding upstream 126630 34227307 ~ 34236487 (+)
pacs1a LOC106563701 coding upstream 167305 34178831 ~ 34195217 (+)
LOC118945289 NA coding downstream 29570 34393990 ~ 34397166 (+)
LOC110510141 LOC106563694 coding downstream 83419 34447839 ~ 34455631 (+)
LOC110510140 NA coding downstream 91994 34456414 ~ 34462457 (+)
znrd2 ssa27 coding downstream 105432 34469852 ~ 34472094 (+)
LOC110510143 LOC106563691 coding downstream 108147 34472567 ~ 34477333 (+)
G2177422 NA non-coding upstream 6059 34356240 ~ 34356463 (+)
G2177420 NA non-coding upstream 7357 34354938 ~ 34355165 (+)
G2177408 NA non-coding upstream 36889 34325423 ~ 34325633 (+)
G2177399 NA non-coding upstream 46912 34315389 ~ 34315610 (+)
G2177393 NA non-coding upstream 57089 34305230 ~ 34305433 (+)
G2177496 NA non-coding downstream 87753 34452173 ~ 34452650 (+)
G2177506 NA non-coding downstream 130194 34494614 ~ 34495869 (+)
G2177507 NA non-coding downstream 131885 34496305 ~ 34496775 (+)
G2177515 NA non-coding downstream 174850 34539270 ~ 34539757 (+)
G2177471 NA non-coding downstream 181652 34546072 ~ 34546586 (+)
LOC110510125 LOC106563697 other upstream 227123 34105921 ~ 34135553 (+)
cxxc5a LOC106563628 other upstream 1126987 33212994 ~ 33235535 (+)
LOC110509425 LOC106563572 other upstream 2236444 32115629 ~ 32150579 (+)
G2175413 NA other upstream 2324786 32037047 ~ 32037736 (+)
LOC110510159 LOC106563679 other downstream 438519 34784319 ~ 34825545 (+)
ndufa2 ndua2 other downstream 1141428 35505848 ~ 35507048 (+)
G2179418 NA other downstream 1487234 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 1548070 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 2314151 36678571 ~ 36680297 (+)

Expression


Co-expression Network