Gene
RNA
| Item | Value |
|---|---|
| gene id | G2177496 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048593.1 |
| NCBI id | CM023247.2 |
| chromosome length | 47748341 |
| location | 34452173 ~ 34452650 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC101165200 isoform X2 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU2488926 | True | 440 | lncRNA | 0.38 | 2 | 34452173 | 34452650 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945289 | NA | coding | upstream | 55007 | 34393990 ~ 34397166 (+) |
| LOC110510136 | LOC106602966 | coding | upstream | 116432 | 34329181 ~ 34335741 (+) |
| LOC110509380 | NA | coding | upstream | 148826 | 34299885 ~ 34303347 (+) |
| LOC110510134 | LOC106563705 | coding | upstream | 161619 | 34279612 ~ 34290554 (+) |
| LOC110510132 | rin1 | coding | upstream | 216281 | 34227307 ~ 34236487 (+) |
| LOC110510140 | NA | coding | downstream | 3764 | 34456414 ~ 34462457 (+) |
| znrd2 | ssa27 | coding | downstream | 17202 | 34469852 ~ 34472094 (+) |
| LOC110510143 | LOC106563691 | coding | downstream | 19917 | 34472567 ~ 34477333 (+) |
| ehbp1l1b | LOC100380650 | coding | downstream | 25813 | 34478463 ~ 34516156 (+) |
| LOC110510145 | rab1a | coding | downstream | 63972 | 34516622 ~ 34521725 (+) |
| G2177426 | NA | non-coding | upstream | 87753 | 34362522 ~ 34364420 (+) |
| G2177422 | NA | non-coding | upstream | 95710 | 34356240 ~ 34356463 (+) |
| G2177420 | NA | non-coding | upstream | 97008 | 34354938 ~ 34355165 (+) |
| G2177408 | NA | non-coding | upstream | 126540 | 34325423 ~ 34325633 (+) |
| G2177399 | NA | non-coding | upstream | 136563 | 34315389 ~ 34315610 (+) |
| G2177506 | NA | non-coding | downstream | 41964 | 34494614 ~ 34495869 (+) |
| G2177507 | NA | non-coding | downstream | 43655 | 34496305 ~ 34496775 (+) |
| G2177515 | NA | non-coding | downstream | 86620 | 34539270 ~ 34539757 (+) |
| G2177471 | NA | non-coding | downstream | 93422 | 34546072 ~ 34546586 (+) |
| G2177470 | LOC106563688 | non-coding | downstream | 99659 | 34552309 ~ 34565130 (+) |
| LOC110510125 | LOC106563697 | other | upstream | 316774 | 34105921 ~ 34135553 (+) |
| cxxc5a | LOC106563628 | other | upstream | 1216638 | 33212994 ~ 33235535 (+) |
| LOC110509425 | LOC106563572 | other | upstream | 2326095 | 32115629 ~ 32150579 (+) |
| G2175413 | NA | other | upstream | 2414437 | 32037047 ~ 32037736 (+) |
| LOC110510159 | LOC106563679 | other | downstream | 350289 | 34784319 ~ 34825545 (+) |
| ndufa2 | ndua2 | other | downstream | 1053198 | 35505848 ~ 35507048 (+) |
| G2179418 | NA | other | downstream | 1399004 | 35851654 ~ 35856462 (+) |
| G2179454 | LOC106602907 | other | downstream | 1459840 | 35912490 ~ 35925031 (+) |
| G2180218 | LOC106563757 | other | downstream | 2225921 | 36678571 ~ 36680297 (+) |
