Item | Value |
---|---|
gene id | G2177506 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048593.1 |
NCBI id | CM023247.2 |
chromosome length | 47748341 |
location | 34494614 ~ 34495869 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU2488936 | True | 682 | lncRNA | 0.48 | 2 | 34494614 | 34495869 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110510143 | LOC106563691 | coding | upstream | 17281 | 34472567 ~ 34477333 (+) |
znrd2 | ssa27 | coding | upstream | 22520 | 34469852 ~ 34472094 (+) |
LOC110510140 | NA | coding | upstream | 32157 | 34456414 ~ 34462457 (+) |
LOC110510141 | LOC106563694 | coding | upstream | 38983 | 34447839 ~ 34455631 (+) |
LOC118945289 | NA | coding | upstream | 97448 | 34393990 ~ 34397166 (+) |
LOC110510145 | rab1a | coding | downstream | 20753 | 34516622 ~ 34521725 (+) |
cd248b | LOC106563689 | coding | downstream | 45951 | 34541820 ~ 34544760 (+) |
LOC100136033 | LOC100136033 | coding | downstream | 85883 | 34581752 ~ 34586596 (+) |
LOC110510150 | LOC106563687 | coding | downstream | 95952 | 34591821 ~ 34596053 (+) |
slc7a3a | LOC106563685 | coding | downstream | 102957 | 34598826 ~ 34611290 (+) |
G2177496 | NA | non-coding | upstream | 41964 | 34452173 ~ 34452650 (+) |
G2177426 | NA | non-coding | upstream | 130194 | 34362522 ~ 34364420 (+) |
G2177422 | NA | non-coding | upstream | 138151 | 34356240 ~ 34356463 (+) |
G2177420 | NA | non-coding | upstream | 139449 | 34354938 ~ 34355165 (+) |
G2177408 | NA | non-coding | upstream | 168981 | 34325423 ~ 34325633 (+) |
G2177507 | NA | non-coding | downstream | 436 | 34496305 ~ 34496775 (+) |
G2177515 | NA | non-coding | downstream | 43401 | 34539270 ~ 34539757 (+) |
G2177471 | NA | non-coding | downstream | 50203 | 34546072 ~ 34546586 (+) |
G2177470 | LOC106563688 | non-coding | downstream | 56440 | 34552309 ~ 34565130 (+) |
G2177476 | NA | non-coding | downstream | 84775 | 34580644 ~ 34581052 (+) |
G2177424 | NA | other | upstream | 33845 | 34359624 ~ 34460769 (+) |
LOC110510132 | rin1 | other | upstream | 262431 | 34227307 ~ 34236487 (+) |
LOC110510125 | LOC106563697 | other | upstream | 359215 | 34105921 ~ 34135553 (+) |
cxxc5a | LOC106563628 | other | upstream | 1259079 | 33212994 ~ 33235535 (+) |
LOC110509425 | LOC106563572 | other | upstream | 2368536 | 32115629 ~ 32150579 (+) |
LOC110510159 | LOC106563679 | other | downstream | 307070 | 34784319 ~ 34825545 (+) |
ndufa2 | ndua2 | other | downstream | 1009979 | 35505848 ~ 35507048 (+) |
G2179418 | NA | other | downstream | 1355785 | 35851654 ~ 35856462 (+) |
G2179454 | LOC106602907 | other | downstream | 1416621 | 35912490 ~ 35925031 (+) |
G2180218 | LOC106563757 | other | downstream | 2182702 | 36678571 ~ 36680297 (+) |