G2177506



Basic Information


Item Value
gene id G2177506
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 34494614 ~ 34495869 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU2488936
GTTCTATCAGTTCCATCAATTCCATCAGTTCCACCAGTTCCAtcagttccattagttccatcaGTTCCACCAGTTCCATCAGTTCCATCAGTTCCACCAGTTCCATAAGTTCCACCAGTTGCACCAGTTCCCCCAGTTCCAtcagttccattagttccatcaGTTCCACCAGTTCCACCAGTTCCATTAGTTCCACCAGTTCCATCAATTCCATCAGTTCCACCAGTTCCATCAGTTCCACCAGTTCCATTAGTTCCCCCAGTTCCACCAGTTCCATTAGTTCCCCCAGTTCCATCAGTTCCCTCAGTTCCCTCAGTTCCATTAGTTCCCCCAGTTCCATCATTTCCCCCAGTTCCCCCAGTTCCATCAGTTCCATCAGTTCCATTAGTTCCACCAGTTCTATCAGTTCCATCAATTCGAtcagttccattagttccatcaGTTCCACCAGTTCCATCAGTTCCATCAGTTCCACCAGTTCCATCAGTTCCACCAGTTGCACCAGTTCCCCCAGTTCCATCAGTTCCATTAGTTCCACCAGTTCCACCAGTTCCATTAGTTCCACCAGTTCCATCAATTCCATCAGTTCCACCAGTTCCATCAGTTCCACCAGTTCCATTAGTTCCCCCAGTTCCACCAGTTCCATTAGTTCCCCCAGTTCCATCAGTTCCCTCAGTTCCCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU2488936 True 682 lncRNA 0.48 2 34494614 34495869

Neighbor


gene id symbol gene type direction distance location
LOC110510143 LOC106563691 coding upstream 17281 34472567 ~ 34477333 (+)
znrd2 ssa27 coding upstream 22520 34469852 ~ 34472094 (+)
LOC110510140 NA coding upstream 32157 34456414 ~ 34462457 (+)
LOC110510141 LOC106563694 coding upstream 38983 34447839 ~ 34455631 (+)
LOC118945289 NA coding upstream 97448 34393990 ~ 34397166 (+)
LOC110510145 rab1a coding downstream 20753 34516622 ~ 34521725 (+)
cd248b LOC106563689 coding downstream 45951 34541820 ~ 34544760 (+)
LOC100136033 LOC100136033 coding downstream 85883 34581752 ~ 34586596 (+)
LOC110510150 LOC106563687 coding downstream 95952 34591821 ~ 34596053 (+)
slc7a3a LOC106563685 coding downstream 102957 34598826 ~ 34611290 (+)
G2177496 NA non-coding upstream 41964 34452173 ~ 34452650 (+)
G2177426 NA non-coding upstream 130194 34362522 ~ 34364420 (+)
G2177422 NA non-coding upstream 138151 34356240 ~ 34356463 (+)
G2177420 NA non-coding upstream 139449 34354938 ~ 34355165 (+)
G2177408 NA non-coding upstream 168981 34325423 ~ 34325633 (+)
G2177507 NA non-coding downstream 436 34496305 ~ 34496775 (+)
G2177515 NA non-coding downstream 43401 34539270 ~ 34539757 (+)
G2177471 NA non-coding downstream 50203 34546072 ~ 34546586 (+)
G2177470 LOC106563688 non-coding downstream 56440 34552309 ~ 34565130 (+)
G2177476 NA non-coding downstream 84775 34580644 ~ 34581052 (+)
G2177424 NA other upstream 33845 34359624 ~ 34460769 (+)
LOC110510132 rin1 other upstream 262431 34227307 ~ 34236487 (+)
LOC110510125 LOC106563697 other upstream 359215 34105921 ~ 34135553 (+)
cxxc5a LOC106563628 other upstream 1259079 33212994 ~ 33235535 (+)
LOC110509425 LOC106563572 other upstream 2368536 32115629 ~ 32150579 (+)
LOC110510159 LOC106563679 other downstream 307070 34784319 ~ 34825545 (+)
ndufa2 ndua2 other downstream 1009979 35505848 ~ 35507048 (+)
G2179418 NA other downstream 1355785 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 1416621 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 2182702 36678571 ~ 36680297 (+)

Expression



Co-expression Network