G2177471


Basic Information

Item Value
gene id G2177471
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 34546072 ~ 34546586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2488901
TGGTAACACTTCCTATGAATACCGTATTATACGGATATCTGCATTATATGGACATTTAGAATGGTTATAGTATGCAAGGATTTAGAGTACTATGTGAACAGGTTGTATAAAGCCTTCACTTGTCTTGCTTTATAATACAAAATACTCTTATTATTCATAATTCGCCGTTATCTTGTAAAGACTAATAGATCATCGCAACACTTGCAAAAGTAATGGAGAAAAATGTATATGTCGacgaggatgggattcgaacccacgcgtgcagagcacaatggattagcagtccatcgccttaaccactcggccacctcgtCGGTTGGAATATTTGCGGAAAATATCTAGATTTATCCGTAGAAAATAATTTTATGCGCGTTAATAATTTGCTATTATGCTTTGCTTTTAGATTTATTTGCACCAGTTTACTACTGTAGTGAATATACCATTCCAAAACTACGTTAAATTGCTTTGGATTTATACAACATGAGGTGGGATTAGTCCCCATCTCCCAGACAGTT

Function

NR:

description
PREDICTED: dipeptidyl peptidase 3 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2488901 True 515 lncRNA 0.37 1 34546072 34546586

Neighbor

gene id symbol gene type direction distance location
cd248b LOC106563689 coding upstream 1312 34541820 ~ 34544760 (+)
LOC110510145 rab1a coding upstream 24347 34516622 ~ 34521725 (+)
ehbp1l1b LOC100380650 coding upstream 29916 34478463 ~ 34516156 (+)
LOC110510143 LOC106563691 coding upstream 68739 34472567 ~ 34477333 (+)
znrd2 ssa27 coding upstream 73978 34469852 ~ 34472094 (+)
LOC100136033 LOC100136033 coding downstream 35166 34581752 ~ 34586596 (+)
LOC110510150 LOC106563687 coding downstream 45235 34591821 ~ 34596053 (+)
slc7a3a LOC106563685 coding downstream 52240 34598826 ~ 34611290 (+)
LOC118945290 NA coding downstream 88658 34635244 ~ 34638008 (+)
LOC110510153 LOC106563683 coding downstream 91647 34638233 ~ 34661249 (+)
G2177515 NA non-coding upstream 6315 34539270 ~ 34539757 (+)
G2177507 NA non-coding upstream 49297 34496305 ~ 34496775 (+)
G2177506 NA non-coding upstream 50203 34494614 ~ 34495869 (+)
G2177496 NA non-coding upstream 93422 34452173 ~ 34452650 (+)
G2177426 NA non-coding upstream 181652 34362522 ~ 34364420 (+)
G2177470 LOC106563688 non-coding downstream 5723 34552309 ~ 34565130 (+)
G2177476 NA non-coding downstream 34058 34580644 ~ 34581052 (+)
G2177518 NA non-coding downstream 66243 34612829 ~ 34614298 (+)
G2177537 NA non-coding downstream 108857 34655443 ~ 34657869 (+)
G2177532 NA non-coding downstream 115687 34662273 ~ 34662564 (+)
G2177424 NA other upstream 85303 34359624 ~ 34460769 (+)
LOC110510132 rin1 other upstream 313889 34227307 ~ 34236487 (+)
LOC110510125 LOC106563697 other upstream 410673 34105921 ~ 34135553 (+)
cxxc5a LOC106563628 other upstream 1310537 33212994 ~ 33235535 (+)
LOC110509425 LOC106563572 other upstream 2419994 32115629 ~ 32150579 (+)
LOC110510159 LOC106563679 other downstream 256353 34784319 ~ 34825545 (+)
ndufa2 ndua2 other downstream 959262 35505848 ~ 35507048 (+)
G2179418 NA other downstream 1305068 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 1365904 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 2131985 36678571 ~ 36680297 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_10167646_10169639 NA coding CI01000304 null 10166187 ~ 10169639 (-)