G2177532


Basic Information

Item Value
gene id G2177532
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048593.1
NCBI id CM023247.2
chromosome length 47748341
location 34662273 ~ 34662564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU2488975
cctttaacctgtctcctcaccttcatctacattgattgaaatgaatttaacaagtgacatcaataagggatcatagctttcacctggattcacctggtcagtctacgtcatggaaagaggtccacaatcgccatcacactgcacactgccctatcctatctggacaagaggaatacctatgtgagaatgctgttcattgactacagctcagcattcaacaccatagtgccctccaaactcatcagaTTGagactatctattgcatcttagccgctctgtcactgctcatcca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU2488975 True 292 lncRNA 0.44 1 34662273 34662564

Neighbor

gene id symbol gene type direction distance location
LOC110510153 LOC106563683 coding upstream 1024 34638233 ~ 34661249 (+)
LOC118945290 NA coding upstream 24265 34635244 ~ 34638008 (+)
slc7a3a LOC106563685 coding upstream 50983 34598826 ~ 34611290 (+)
LOC110510150 LOC106563687 coding upstream 66220 34591821 ~ 34596053 (+)
LOC100136033 LOC100136033 coding upstream 75677 34581752 ~ 34586596 (+)
LOC110510155 LOC106563682 coding downstream 40761 34703325 ~ 34715546 (+)
LOC110510157 LOC106563680 coding downstream 86306 34748870 ~ 34761158 (+)
LOC110510158 LOC106563717 coding downstream 101118 34763682 ~ 34782858 (+)
LOC110510159 LOC106563679 coding downstream 121755 34784319 ~ 34825545 (+)
si:ch73-362m14.2 LOC106563676 coding downstream 153142 34815706 ~ 34822942 (+)
G2177537 NA non-coding upstream 4404 34655443 ~ 34657869 (+)
G2177518 NA non-coding upstream 47975 34612829 ~ 34614298 (+)
G2177476 NA non-coding upstream 81221 34580644 ~ 34581052 (+)
G2177470 LOC106563688 non-coding upstream 97143 34552309 ~ 34565130 (+)
G2177471 NA non-coding upstream 115687 34546072 ~ 34546586 (+)
G2177548 NA non-coding downstream 13237 34675801 ~ 34676298 (+)
G2177606 NA non-coding downstream 100233 34762797 ~ 34763001 (+)
G2177614 NA non-coding downstream 107237 34769801 ~ 34770015 (+)
G2177616 NA non-coding downstream 110266 34772830 ~ 34773119 (+)
G2177618 NA non-coding downstream 113828 34776392 ~ 34776622 (+)
G2177424 NA other upstream 201504 34359624 ~ 34460769 (+)
LOC110510132 rin1 other upstream 430090 34227307 ~ 34236487 (+)
LOC110510125 LOC106563697 other upstream 526874 34105921 ~ 34135553 (+)
cxxc5a LOC106563628 other upstream 1426738 33212994 ~ 33235535 (+)
LOC110509425 LOC106563572 other upstream 2536195 32115629 ~ 32150579 (+)
ndufa2 ndua2 other downstream 843284 35505848 ~ 35507048 (+)
G2179418 NA other downstream 1189090 35851654 ~ 35856462 (+)
G2179454 LOC106602907 other downstream 1249926 35912490 ~ 35925031 (+)
G2180218 LOC106563757 other downstream 2016007 36678571 ~ 36680297 (+)

Expression


Co-expression Network